KEGG   Gossypium raimondii: 105798358
Entry
105798358         CDS       T04129                                 
Name
(RefSeq) nuclear pore complex protein GP210
  KO
K14314  nuclear pore complex protein Nup210
Organism
gra  Gossypium raimondii
Pathway
gra03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    105798358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105798358
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     105798358
SSDB
Motif
Pfam: Big_2 HL_N-beta TMEM132
Other DBs
NCBI-GeneID: 105798358
NCBI-ProteinID: XP_052476812
Position
9:9028329..9050607
AA seq 1953 aa
MSKMIRFIFWLFSTVSLTAVIGTASHSSSGPHIADVNILLPPKMTNPVEYRLQGSDGCFK
WSWDHHEILSVLPEYNVTNHCSTSARLRSIAPYSGRKETAVYARDVHSGTVIRCKVFIDN
FDRIQIFHNSIKLDLDGLATLRVRAFDTEDNVFSSLVGLQFMWKLMPKTSGLSHHLAHVP
LKDSPLSDCGGLCGDLDIQIKLEEKGVFSDLFVVKGIHIGHENVSVQLLEPPLKGMGDKI
VLTVAEAMSLYPPSPVFVLIKATLHYSLKVIRENVPQEVSLPSPHHRWSVTNSSVAEMDS
TMGVIHALTLGETTVIVEDTRVDGHSQMSSLKVVLPDTLSMYISLFSASGDPIEGMEPIP
PMARWYVVSGKQYLIQLKVFSRGPYAQEIYITENDDIEFYDNQSGYWKIVPVLEPIASRY
GWRSARILEATSEGLGKLTASLVYYNGHHDTKEVLKVMQEVIVCDQVEFSLEKVTGESQI
ILLPWAPAVHQEMELKAAGGCAKESSDYKWFSSDITVISVTAYGVVQAKKPGKATVKVVS
SFDSFNYDEVMIEVSIPSSMVMLQNFPAETVVGSHLPAAVSMKASNDAYFSRCDAFHSFI
KWKAGSESFIVTNATGEAPVLEKEDNLELHVPVDGPPCSWTYIYASASGQAMLHATFSKE
YHHIDPSLSGPIVLRATSRIASYMPLTLHQAGDGNRFGGYWVNTARIEATNQLEDRDKVY
LVPGTQVDVILHGGPERWDKGVEFVQKVEIFDEEHAHDNGVDVHLISSSHGSLYRLLCQT
LGTYRLVFKRGNLVGDDHPLPTLVEASLSLACSLPSSVVVIVDEPVNNRDVIRTAIQADR
SPGQIQVTPVTVANGRTIRVAAVSISTTGEPFANSSSLCLKWELGSCDSLAYWNHAYDSE
NYNTSSWERFLVLRNESGSCIVRATVTGFFGSSSADRYSAKLLEGSDNFLTDAARLQLVS
TLRVSPEFNLLYFNPNAKTNLSITGGSCFLEAVVNDSRVIEVTQSPPGLQCLQLILSPKG
LGTAVVTVYDIGLTPNLVASVVVQVADIDWIEIMSGEEISLMEGSSKSIGLMAGVDDGST
FDIHQYAYMNIHVHIEDDIVELADKDDFSSPSGRYIGAQTFKIRAKHLGVTTLYVSARRH
SGHELLSQAIKVEVYAPPTIHPPNIFLVPGASYLLTIKGGPTLGAFVEYTSTDDAIATVD
KTSGRLTATSPGNTTLLATVYGNGGNVICQADSSVKVGVPSLAILNVQSEQLAVGRETPI
YPLFSEANLFSFYGLCKDYKWTIEDEEVLTFGVPLVGSEAVQRVSYVDNKELSFINVLYG
RAPGRTNIAVSFSCDFISSGSHLEARTYNASLSLLVVSDLPLALGALITWLLPPHYTTSS
ILPSSAESHGQKDGQNRKGSIIYSLLRNCEEATEASQRAVSIDGDKIKTEESNNLACIQA
KDRITGRTEIASCVRVAEVEQIRITNKELPVHSIDLAVGAEIELSISYHDAIGNPFYEAS
NVILHHAETNYPDVVSVNNTRDTNMIHLKAMRHGRALLRVSIDNHPQKSDYMLISVGAYV
HPQNPVLHQGSSINFSVVGSDDQASGHWHSVNESVIVLHTQSGQAEAVGEGSTQVSFESS
NVKLRTTVTVLPGSTLVVEAPKEMLTNVPFPSQGFSFSVKFSDTNDKINTVGSSKGAPYD
CRVDPPFVGYAKPWIDLDTGNSFCLFFPYSPEHLVRTIPKLKDMKPYIYVSINASMKEHS
HVSGSASALFVGGFSIMQMGKDIAQINLTPDFNKTIVTILGNTDVEIHWRGQDLLAINPI
QKEGFGLSCHIDYEVKALSAKRFADKIIVKLPSTGQRVEVDVNYEPDEKSEATINFSFWA
KVMGSIALTVITLIIGFICFLDRPLGSSQPPSTPLCSSSISAPVTPDRRSPLHLDEQSPR
TPQPFVDYVRRTIDETPYYRREGRRRFNPQNTY
NT seq 5862 nt   +upstreamnt  +downstreamnt
atgtcaaagatgattcgcttcattttttggcttttttccactgtttcgttaacggcggtg
atcggaacggcgtcgcattcgagctctggtcctcacatagctgacgtcaacatactttta
cctccgaaaatgacgaaccccgtcgaatatcggcttcaaggaagcgacggttgtttcaaa
tggtcgtgggatcatcatgagattttatcagttctgccggagtataatgtgaccaatcat
tgctcgacaagtgcacggctgagatcgattgcgccgtactccggtagaaaagaaactgcg
gtttacgctagggacgtgcacagtggaaccgtgatccggtgcaaggttttcattgataat
tttgatagaattcaaatatttcataattctattaagcttgatcttgatggactcgctact
ctccgagttcgtgcctttgatactgaagacaatgtgttttcatcattggtgggtttacaa
ttcatgtggaagctgatgccaaaaactagtgggttgagtcatcaccttgcccatgttcct
ttgaaggattctcccttaagtgactgtggtggactgtgtggtgacttagatatccagata
aaacttgaagaaaagggtgtattttcagatttatttgttgtaaaaggcattcatattggc
catgagaatgtttcagtacaattgcttgagccaccgttaaagggcatgggtgataagatt
gttctaactgttgcagaagctatgtcactatatccaccgtcacctgttttcgtcctcatt
aaggctactctccattatagtcttaaggttatccgtgagaatgttcctcaagaggtatct
cttccatcgccgcatcatcgatggtctgtcacaaacagttcagttgctgaaatggactct
acgatgggtgtcattcatgcgctaacattgggtgaaacaactgtcattgttgaagatact
agagtcgatggccatagtcagatgtcatctcttaaggtggtcttgccagataccttgtct
atgtacatatcactattttctgcttccggtgatccaatagaaggaatggaacccattcca
cctatggcacgttggtatgttgtttctggaaaacaatacctcattcaactcaaggttttt
tctcggggtccatatgcacaggaaatctacattactgagaatgatgatattgagttctat
gacaaccaatctggctattggaaaattgtcccagtgttagagcctattgcatctagatac
ggctggaggagtgctagaattttggaagctacttcagagggactggggaaactgacagcc
tctttagtttactataatggacatcatgataccaaggaggttctcaaggttatgcaagag
gttattgtatgtgaccaagtagagtttagcttggaaaaagtaactggtgaatctcaaatt
attctccttccttgggcacctgcagtacatcaggagatggagttaaaggctgctggaggt
tgtgcaaaagagtcgagtgactataaatggttttcttcggacattactgttatttcggtc
actgcatatggagttgtccaggcgaaaaagcctggtaaagctacagtgaaggtggtgtca
agttttgattcattcaattatgacgaggttatgattgaagtttcaattccatcctctatg
gttatgttacaaaacttccctgctgagactgttgtgggatcacacctcccagctgctgtt
tcaatgaaagcatcaaacgatgcctacttttctagatgtgatgcatttcattcctttata
aagtggaaagctggaagcgagtctttcattgttaccaatgctacaggagaggcaccagtc
cttgaaaaggaagataatttggaactccatgtaccagtagatggtcctccatgttcatgg
acttacatatatgcttctgcatctggtcaagctatgctgcacgcaacattttcaaaggaa
tatcatcatattgatccctctttaagtgggcctattgttttaagagcaacttccagaatt
gcatcatacatgcctcttactctgcaccaggcaggtgatgggaaccggtttggtggttac
tgggttaatacagctcgaatagaagctactaatcaactagaagatcgagataaggtatat
cttgtccctggaacacaagtagatgtcattcttcatggagggccagaaaggtgggacaaa
ggtgttgagtttgtgcagaaagtggagatttttgatgaagaacatgcacatgacaatggg
gttgatgttcatctgatttctagcagccatggcagtttgtatagacttttatgccaaaca
ctggggacctatagacttgtttttaaacgtggaaatttggttggagatgatcatcctctt
cccacattagtggaagcttcattgtctcttgcttgcagccttccttcctcagttgtggta
atagtggatgaacctgttaataatcgagatgttattcggactgcaattcaagctgaccgt
agcccggggcaaattcaagtcaccccagttactgtggctaatgggcgaactattagagtg
gctgctgtcagtattagtaccactggggagccttttgcaaactcttcttccctgtgctta
aagtgggaattaggcagttgtgacagtctggcttattggaaccatgcttatgattcagag
aactataatacgtctagttgggagaggttcctggtcttgcgaaacgaatcgggatcgtgt
attgttcgtgccaccgttactggattctttggtagttcctcagctgatcgttattctgct
aaattgctagaaggttcagataattttcttacagatgctgcacggttacagcttgtttct
actctaagagtgagtccggagttcaatctgttatatttcaatcctaatgctaagacaaat
ttgtcaattactggagggagctgtttcttggaagctgttgtgaatgattctcgagtcatt
gaagttactcagtcaccacctggtttacaatgcttacaactgattttatcaccaaaaggc
cttggaactgcagttgtgacagtttatgatattgggcttactcctaatcttgtggcttct
gtcgtggtccaagttgcagatatagactggattgagattatgtctggagaagagataagc
cttatggaaggaagttcaaagtcaattggtttgatggctggggttgatgatggaagcact
tttgacattcatcagtatgcgtacatgaatatccatgtgcatattgaggatgatatagtt
gaacttgcggacaaggatgatttctcaagccctagcggtcgatatataggtgcacagact
ttcaaaatcagggcaaaacatcttggtgtcacaactctttacgtcagtgctagacgacat
tctggacatgaactgttgagtcaagctataaaggttgaggtttatgctccaccaacaatt
cacccaccaaatattttcctagtaccaggcgcttcttacttgctcactattaaaggaggt
ccgacccttggtgcctttgtggaatatacaagtacagatgatgccattgcaacagtggac
aaaacttcagggcgattgactgcaacttcacctggaaatactacactgcttgccactgtt
tatgggaatggcggtaatgtgatttgtcaagcagatagcagtgttaaagtgggagtacca
tctttagcaatattgaatgtacaaagtgaacaacttgctgttggccgtgagacaccaatt
tatcctttattttctgaggcaaacttattttctttctatgggctatgcaaagactacaag
tggaccatagaagatgaagaggtgttaacatttggggttccactggttggttcagaagca
gttcaacgcgttagttatgtggataacaaagaacttagttttatcaatgttctgtatgga
agggccccagggaggacaaatattgcagtttcattctcatgtgactttatttcttctggt
tcacacttggaggcaaggacttacaatgcttctctctcactattggtggtgtctgatctt
cccctggcacttggagctctgatcacatggcttcttcctccccattataccacatctagc
atcttaccttcatcagcagagtcacatgggcaaaaagatggtcagaatcgcaaaggaagc
ataatctattctttgttaagaaattgtgaggaagcaacagaagcttcacagcgtgctgtt
tctattgatggggacaaaataaaaacagaagagagcaataatcttgcttgcattcaagcc
aaagatcgcatcactgggagaactgagattgcttcttgtgtccgggttgctgaggtggag
caaataagaataacaaacaaggagcttccagtccattcaattgatctcgctgttggtgca
gaaattgaactttcaataagttaccatgatgctataggaaatcccttttacgaggcttct
aatgttattctccaccatgctgaaactaattatcctgatgtcgtctctgttaacaatacc
cgtgacaccaatatgattcatctaaaggcaatgcgacatggtagggctcttctccgagta
tcaattgataatcatccacagaagtcggactatatgctgatttcagttggtgcctatgtg
catccccaaaatccagttcttcaccaggggagttctattaacttcagcgtagtaggctct
gatgatcaagcttcaggtcactggcatagtgtcaatgaaagtgttatagttttacacact
caatctggacaggcggaagcagttggagagggatcgacccaagtttctttcgaaagttca
aatgtcaagctgcgaacaacagtcacagttctacctggaagtacacttgttgtggaagcc
ccaaaggagatgctgacaaatgttccgtttccctcccaaggatttagcttttccgtgaag
ttcagtgatacaaatgacaagatcaacactgttggaagcagtaaaggagccccatatgac
tgtagggtagaccctccttttgtcggctatgcaaagccatggatagaccttgatactggc
aactcgttttgccttttcttcccttactccccagagcatttggtccgcaccatacccaag
ttgaaggacatgaaaccatatatatatgtttccattaatgcttcaatgaaagaacacagc
catgtttctggatctgcatctgcactttttgtcgggggattttccataatgcaaatggga
aaggatatagcacagataaatctgacaccagactttaacaagactattgtaaccatcttg
ggaaacacagatgttgaaatccactggcgtggccaagatttgttagcaatcaatcccatc
cagaaagaaggatttggtctcagttgccacatagattatgaggtaaaagcacttagtgcc
aagcgatttgcagataaaatcattgtcaaactcccatccaccggtcaaagagtggaagtg
gatgtcaactatgaaccagatgaaaaatctgaagctactattaacttttccttttgggcg
aaggttatgggaagtattgccctaacagtaatcacactgatcattggcttcatatgtttc
cttgaccgacctcttggatcatcccagccaccatccactcctctgtgcagttcaagcata
tcagcacctgtaacgccagaccggagaagtccccttcatttggacgaacaatctccacga
acaccgcagccatttgtagattatgtgagaagaacaatagacgaaactccatactatcgg
cgagaaggtaggaggaggtttaatcctcagaacacatactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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