KEGG   Gossypium raimondii: 105798387
Entry
105798387         CDS       T04129                                 
Name
(RefSeq) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gra  Gossypium raimondii
Pathway
gra00040  Pentose and glucuronate interconversions
gra01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gra00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    105798387
Enzymes [BR:gra01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     105798387
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix
Other DBs
NCBI-GeneID: 105798387
NCBI-ProteinID: XP_012483889
UniProt: A0A0D2RWM1
Position
9:complement(10019851..10021541)
AA seq 407 aa
MGSSTFSYIFHILFISLLVPNLASSSPVQDPEFVVDEVHKSINASRRNLGYLSCGTGNPI
DDCWRCDPNWEKNRQRLADCAIGFGKHAMGGKNGRIYVITDAGDDDPVNPRPGTLRHAVI
QDEPLWIIFKRDMVITLKQELLMNSFKTIDGRGASVHISGGPCITIHYVSNIIIHGIHIH
DCKPGGSTIIRDSPHHAGHWTPSDGDGVSIFGSKNIWVDHCSLSNCHDGLIDVIHGSTAV
TISNNYMTHHDKVMLLGHSDSYMQDKNMQVTVAFNHFGEGLIQRMPRCRLGYFHVVNNDY
THWEMYAIGGSANPTINSQGNRFLAPNDRSKKEVTKHENAPESEWKRWNWRSEGDLMLNG
AFFRQTGASGASSTFARASSLSARPSSLVGTMTMTAGALKCRRGSHC
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgggatcgtcaacattttcctatatctttcacattctcttcatttccctccttgttcca
aatctagcttcttcctcgccagttcaagatcctgaatttgttgttgatgaagttcacaag
agtatcaatgcttcgaggaggaacttgggttacttgtcatgtggaacaggaaatcccatt
gatgattgttggaggtgtgatccgaactgggagaagaaccggcaaaggttagccgattgc
gcgattgggttcgggaagcatgccatgggaggcaaaaatggtcgaatctatgttattacg
gatgccggcgatgacgacccggtgaaccctaggccgggtactttaaggcatgctgtgatt
caagacgagccattgtggattattttcaagagagatatggtgattacgttgaaacaagaa
ttgttgatgaactctttcaagacaatagacggtcgaggtgcgagcgttcacatatcgggt
ggaccatgcatcaccatccattatgtgtcgaacatcatcatccatggcatccacatacat
gattgtaaacccgggggtagtacaattataagagactctccccatcatgcagggcattgg
actccatcggacggtgatggtgtctcaatctttggcagcaagaatatatgggttgaccat
tgttcattgtcgaattgtcatgatggactcatcgatgtcatccatggatccaccgccgtg
actatatcaaacaactacatgacccatcatgataaagtcatgcttttgggccacagtgat
tcctatatgcaagataaaaacatgcaagtcactgttgcctttaaccatttcggggaaggt
ctaattcaaagaatgccaaggtgtagacttggatatttccatgtggtgaacaacgattac
acccattgggaaatgtacgccattggtggcagtgcaaaccctactatcaacagccaagga
aacaggtttctagcacccaatgatagatcaaagaaagaggtgaccaaacatgagaatgca
ccagagagtgaatggaaacgctggaactggagatccgaaggagacttgatgttgaatgga
gcctttttcaggcaaaccggtgcttctggtgcatcttcaacctttgctagggcttcgagc
cttagtgctagaccatcttctcttgtgggtacaatgacaatgactgctggcgcactcaaa
tgtagaaggggttcccactgctag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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