KEGG   Christiangramia salexigens: LPB144_07380
Entry
LPB144_07380      CDS       T04586                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
grl  Christiangramia salexigens
Pathway
grl03030  DNA replication
grl03430  Mismatch repair
grl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:grl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LPB144_07380
   03430 Mismatch repair
    LPB144_07380
   03440 Homologous recombination
    LPB144_07380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:grl03032]
    LPB144_07380
   03400 DNA repair and recombination proteins [BR:grl03400]
    LPB144_07380
Enzymes [BR:grl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LPB144_07380
DNA replication proteins [BR:grl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     LPB144_07380
DNA repair and recombination proteins [BR:grl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     LPB144_07380
SSDB
Motif
Pfam: RNase_T GIY-YIG Rv2179c-like DEDDh_C
Other DBs
NCBI-ProteinID: APG60241
UniProt: A0A1L3J546
Position
1642506..1643936
AA seq 476 aa
MKDVKFAITDIETTGSGIKGNKITEICVIVVQNGEVIDEYSSLVNPSQSIPLYIESLTGI
NDEMVSSAPAFSEIANEVEEITKDCIFVAHNVNFDYNIIRAEFASLERNFKRKRLCTVRL
TKKLIPGLFSYSLGNICSSINIPHLDRHRAKGDCEATVTLFQRCLSLDPEFDVIKTLLNQ
KTAASYLPPNFKSSDFEKLPVSTGVYFFKDKDGRPIYIGKAKNIKSRIKSHFQERSNRKY
KMMQETYSIDYELTGNELLALLRESELILKYYPKFNKAQKKVSRPYTLTSYHNQKGIERF
ALHKNKIAPVSWMKFYTREDAIKFLEYLCIEFQLCPKYCGLQTGVDVCDHYKITNCSGVC
DDEISIDEYNERVSNAIDHISTYEDSCLLLEQGRHKNEKSFIYLKKGRYSGYGYIESSEE
LNHPGEFKNFLIPQKTSSYADRILNRYLNTKKNIVKIPLATKEKEFAKTEEEIWFG
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgaaagatgtaaagttcgcgatcacagatattgagaccacaggcagtggaattaaaggc
aacaagatcacagagatctgcgtgatcgtcgtccagaacggggaagtgatcgatgaatat
tcctccttagtgaatccaagtcagtcgatcccgctttatatcgaaagcctcaccgggatc
aatgatgagatggtgagcagtgcccctgctttttcagaaatcgccaatgaggtagaagag
attaccaaagactgcatatttgtagctcataatgtcaatttcgactataatattattcgt
gcagaatttgccagccttgaaaggaattttaagcgcaaaagattatgtacggtaaggctg
accaagaagctcattcccggacttttctcttatagccttggaaatatttgcagttccata
aacattccgcatttggatcggcacagggctaagggagattgtgaagccacggttacatta
tttcagcgttgcctctcgctggatcctgaatttgacgttattaaaaccttgctgaaccag
aaaacggctgcttcttaccttccacctaattttaaaagttcagatttcgaaaaactgcct
gtttcaacaggagtctattttttcaaggataaagatggcaggccgatctatattggaaag
gcgaaaaatatcaaaagccggataaaatctcattttcaggaaaggtccaaccggaaatat
aaaatgatgcaggaaacctacagcatagattatgaacttaccggcaatgaacttctcgca
ttattacgtgaatctgaactaatcctgaaatattaccctaaattcaacaaagcacagaaa
aaagtttccagaccttatacccttacctcctaccataatcaaaaaggaattgagcgcttt
gcgcttcataagaacaagatcgctccggttagctggatgaaattctacacacgtgaagac
gccataaaatttcttgaatacctgtgtatagaatttcaactttgtccaaaatattgcggc
ttgcaaacaggagttgatgtgtgtgaccattataagatcactaactgctccggcgtttgt
gacgacgagataagcattgatgaatataatgaacgcgtctccaatgcgatagatcatatc
tcgacctatgaagattcctgcctgcttcttgaacagggaagacataaaaatgagaagtct
tttatttatctaaaaaaaggtcgctattcaggttatggctatatagagagttcggaagag
cttaatcatcccggtgaatttaaaaattttctgatccctcaaaaaacctcaagttatgcc
gacaggatcctaaaccgatacctgaatacgaaaaagaatattgtaaaaataccactagcg
actaaagagaaagaatttgcgaaaactgaagaggagatctggtttggataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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