KEGG   Christiangramia fulva: C7S20_03825
Entry
C7S20_03825       CDS       T05367                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
grs  Christiangramia fulva
Pathway
grs03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:grs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    C7S20_03825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:grs03400]
    C7S20_03825
Enzymes [BR:grs01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     C7S20_03825
DNA repair and recombination proteins [BR:grs03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     C7S20_03825
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S DUF5832 BT4734-like_N
Other DBs
NCBI-ProteinID: AVR44459
UniProt: A0A2R3Z2J0
Position
complement(829125..830042)
AA seq 305 aa
MGTEKKFGNHSFEVSNLDKIFFPKKGYTKADLIEYYEKISDTILPYLKDRPLTMIRFPNG
IDDKRFYQKDEPDYFPKWIKTKSVNKKEGGKTKYVVCNDKETLVYLASQACITPHIWLSK
TDKIDKPDRLIFDLDPSNGDFSEVKKAAKQVRKLLEDDLGLSVYVMTTGSRGLHVVAPIR
RSKTFDEVREFAQKAAKYLESQYSEKLTTAARKNKREDKLFLDVARNGTGQTAVTPYAVR
PIEGAPVATPLDWDELSKSSLSAQSYNIKNIFRRLGSKGDPWKNIDENAKDLSSAIKKLE
KLKKD
NT seq 918 nt   +upstreamnt  +downstreamnt
atgggaacagaaaagaagtttgggaatcacagttttgaggtcagtaatctggacaagata
ttctttccgaaaaaaggttacactaaggctgatcttatagaatattacgagaaaatttcg
gatactatcctaccttatctgaaggaccggccgctgacgatgatccgttttcctaatggg
atcgatgataagcgattttatcagaaagacgaacccgattattttccgaagtggataaaa
acaaaatcagtaaataaaaaagaagggggaaaaaccaaatatgtagtttgtaacgacaag
gaaactctggtttatctggccagccaggcttgtatcactccgcatatctggttgagtaag
accgataagatcgataaacctgatcggcttatttttgacctggatccgtcaaatggggat
ttttccgaagttaaaaaagcggcaaaacaggtccgcaaattactggaagatgatttaggg
ctttcagtttatgtaatgactaccgggtctcgtggtttgcatgttgtcgcgcctatcagg
agaagcaaaacttttgatgaagtccgggaattcgcacagaaagccgcaaaatatctggaa
tctcaatattctgaaaaacttaccacggcggcgagaaagaataaacgggaagataaatta
ttccttgatgtagcccgaaatggaaccggtcaaacggcggtcacgccatacgcggtgagg
ccaattgaaggagcgccggtagccactccgctggattgggatgaattaagcaaatcgtct
ctttcggcacagagctataatattaaaaatatcttcagaagacttggcagtaaaggagat
ccgtggaaaaatattgacgagaatgcgaaggatctttcttcagcaataaaaaaactcgaa
aaacttaaaaaagattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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