KEGG   Christiangramia fulva: C7S20_08015
Entry
C7S20_08015       CDS       T05367                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
grs  Christiangramia fulva
Pathway
grs02020  Two-component system
grs02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:grs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C7S20_08015 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    C7S20_08015 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:grs03021]
    C7S20_08015 (rpoN)
Transcription machinery [BR:grs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C7S20_08015 (rpoN)
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID HTH_12 Acyl-CoA_dh_C SF3b1
Other DBs
NCBI-ProteinID: AVR47378
UniProt: A0A2R3ZAR0
Position
complement(1733193..1734650)
AA seq 485 aa
MLKQQLNLKLSQKLSPQQIQLMKLIQLPTQAFEQRIKQELEENPALEDGREERTEEYEEY
EADNNEEDYDSESIETDIDVDEYLSDDEIPSYRLQANNYSPDDDEKSVPYAAGTSFNQHL
KSQLNTFRFNDTEHEIAEFLVGSVDESGYIRRTVQDIVDDLAFTQNVYTDEETVEKVLKK
VQQLDPAGVGARDLRECLIIQLHRKEPTKQVDLALDLIERSFDHFSKKHYNKLLSRHDIT
EDELRDAIEVIEHLNPKPGGAFSGNMRMVEHVIPDFTIKIEDGELQLSLNGRNAPEMHIS
RDYSNMLKGYKEAKEKTKAQKDAVMFIKQKLDAAKWFIEAIKQRQQTLMLTMSSIMNYQK
EYFLSGDERNLRPMILKDIADEIEMDVSTVSRVANSKYVDTPYGTKLIKEFFSESMKNDQ
GEDVSTREIKKILEMSIEEENKRKPLTDEKLAKVLKDKGYPIARRTVAKYREQLDIPVAR
LRKEI
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgcttaaacaacaattaaatctaaaactctctcagaaactgtccccgcagcagattcag
ctcatgaagttgatccagctgcctacgcaggcttttgaacagcgcataaaacaggagctg
gaagaaaatccggcgcttgaagatggccgtgaagaaagaactgaggagtatgaagaatat
gaagctgataacaatgaggaagattatgacagcgaaagcatagaaaccgatatcgatgtg
gatgaatatctaagcgatgatgaaatccccagttaccggttacaggcaaacaattatagt
cccgacgatgatgaaaagagtgtgccttatgccgcgggaacttcctttaatcagcattta
aaaagtcagttaaatacgttcaggtttaacgatactgaacatgagatcgccgaattcctg
gtgggaagcgtggacgaaagcgggtacataagaagaaccgttcaggatattgtggatgac
ctcgcctttacccaaaatgtttacaccgatgaagaaacagtggaaaaggtgcttaaaaaa
gtacaacaattagatcctgccggagttggagcgcgggatttaagagaatgtttgattatt
cagcttcatcgcaaagagccaacaaaacaggttgacctggctttagaccttatagaacgg
tctttcgatcattttagtaaaaagcattacaacaaactgctttccaggcatgatatcact
gaagatgagcttagggatgccatagaggttatcgagcatctaaatccgaaaccaggagga
gctttttcagggaacatgcgaatggtagagcatgtgatccccgattttacgatcaagatc
gaagatggcgaattacagcttagcctcaatggaagaaacgctcccgaaatgcatatttcc
agagattacagcaatatgcttaaggggtataaagaagcaaaagaaaagaccaaggcgcag
aaagatgccgtgatgttcattaagcaaaaactggatgcggccaaatggtttattgaagcc
attaagcaaagacaacaaacccttatgctgacgatgagttctataatgaattaccaaaaa
gaatattttcttagcggtgacgagcgaaatttgaggccaatgatcctgaaagatatcgcc
gatgagatcgaaatggacgtttctacggtttccagggttgcaaacagcaaatatgtagat
accccttatggaactaaactgatcaaggagtttttctctgaatctatgaaaaatgaccag
ggagaagatgtttctacgcgggagatcaaaaagatcctggaaatgtctattgaagaagaa
aataaaaggaaaccccttaccgatgagaagctggctaaagtactgaaggataaaggatac
ccaatcgcccggagaacggtagcaaaatacagggaacaattagatattcctgtagccagg
ttacgtaaagaaatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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