KEGG   Gemella sanguinis: FOC50_08440
Entry
FOC50_08440       CDS       T06314                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gsa  Gemella sanguinis
Pathway
gsa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    FOC50_08440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsa03400]
    FOC50_08440
Enzymes [BR:gsa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     FOC50_08440
DNA repair and recombination proteins [BR:gsa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FOC50_08440
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 UvrD_C_2 SH3_13 AAA_11 Viral_helicase1 SLFN-g3_helicase AAA_22 PhoH HHH_5 Helicase_RecD nSTAND3 AAA_14 AAA_12 DEAD AAA UvrD-helicase DUF4926 T2SSE AAA_28 HHH CdiA_C AAA_29 Ribosomal_S13
Other DBs
NCBI-ProteinID: QGS08293
Position
1768067..1770394
AA seq 775 aa
MQVVEGYLNKVIFHNEENNYYIISIFLNDNYDFIEGDYLSVVGTFDDIEFIEDELYMFKG
QIVNHRKYGVQLSAIIVEPVIQKDKEAIISYLSSSIFQGIGRKTAEHIVESLGVGALDKI
YEDKESLYNLKGITKQRKDTIYSTIISNKQTQDIILKLNEYNLSNNLILKIYNFYKHNTL
KTISENPYTLVRDIKGISFKTVDKIAELNNIDPNNRNRIIYGFIYTISTFCFSTGNTYIK
KNTLLYNTFNVLYASRKVAIEKDDILIALNYCLEVGKLIEIEDKVFLPEIYYSEYFIYND
IKNRLTKPNNLEISDKLLNKFIKEVEDELNIEYDIVQIEAIKNSVLNNFSILTGGPGTGK
TTIILAVIKIFQKIKNYSLVELQDENKNILTLCAPTGKAAKRMTESTGFFASTIHKAIGW
TTEDENMEEFVSDKKIKSELVIIDEASMIDVFLMHNLLKIIDSNSKIILVGDNDQLPSIA
PGNVLNDLINSNEISTVKLNRIFRQSEHSSIINISHSIKNNIPFDVLENFDDKEFLLASK
NDLLKVITTTYSKLLEISDKEKIQILAPIYKGICGINEINKTIQDLFNKNELLIEYGELI
YKAEDRVMQLVNRPEDNIFNGDIGYIYDIYKENGKYKIIIDYDNNLVTYEKQDLNQITLS
YACSIHKAQGSEFDNIIIPFIDNYNFMLNKNLTYTAVTRAKNKLILCGNPNVFYKSIEPN
NTVTRQTALCWFFTTNNNLDKTEIILEEDYILNYQNINNIDPMIGMDDIKPSDFL
NT seq 2328 nt   +upstreamnt  +downstreamnt
atgcaagttgtagaggggtatttaaataaggttatttttcataatgaagaaaataattac
tatattatatcaatatttttaaatgataattatgattttattgaaggtgattatcttagt
gtcgttggtacatttgatgatattgaatttatagaagatgaactttatatgtttaaaggg
caaattgttaatcatagaaaatatggagttcaactatccgcgataatagttgaaccggta
atacaaaaagataaagaagctattatttcatatttatctagctctatttttcaagggatt
ggtagaaaaacagctgagcatatagttgaaagcttaggagttggtgctcttgataagata
tatgaggataaagaatcgctttataatttaaaaggcattacaaaacaacgaaaagataca
atctactctacaattatttctaataaacaaacacaagatattatattaaagttaaatgaa
tataatttaagtaataatttaatattaaaaatttataatttttataagcataatacctta
aaaacaatttcagaaaatccatatacattagttagagatataaaaggaattagttttaaa
actgtagataaaatagctgaactgaataatatagatcctaataatcgtaatagaatcatt
tatggctttatatacaccataagcacattttgtttttcaactggaaatacatatattaaa
aaaaatactttactttataacacatttaacgtattatatgcatctagaaaagttgctata
gaaaaagatgatatattaattgctttaaattattgtttagaagttggaaaattaattgaa
atagaagataaagtattcttaccagaaatttattattcagagtattttatttacaatgat
ataaaaaatcgtttaactaagccaaataatcttgaaataagtgataaattacttaataaa
ttcattaaagaagttgaagatgagcttaatatagaatatgatattgttcaaatagaagca
ataaaaaattctgttttaaacaatttttcaattctaacaggtggaccaggaacaggtaaa
actacaattatattagctgttataaaaatttttcaaaaaataaaaaattatagtttagtt
gaattacaagacgaaaacaagaatatcttaacattatgtgctcctacaggtaaagcagca
aagagaatgacagaaagtacaggtttctttgcttctacaatccataaagctataggttgg
acaactgaggatgaaaacatggaagagtttgttagtgacaaaaaaattaaatctgaactg
gtaattatagatgaagctagtatgattgacgtatttctcatgcataatctattaaaaata
attgattctaactctaagataatacttgtaggtgataatgatcagttaccttctattgct
ccaggaaatgtacttaatgatttaattaactctaatgaaatatcaacagtaaaattaaat
agaatttttaggcaaagtgaacattcaagtataataaatatttcgcattcaattaaaaat
aatattccgtttgatgtacttgaaaattttgatgataaagaattcttattagcttcaaaa
aatgatttattaaaagttataacaactacatatagtaaattactagaaatttcagataaa
gaaaaaattcaaatattagctcctatctataaaggtatttgtggtataaatgaaattaat
aaaactattcaagatcttttcaataaaaatgaattattaatagaatatggagaattaatt
tataaagcagaagatagagttatgcaacttgtaaatagaccggaagataatatatttaat
ggtgatataggatatatatatgatatttacaaagaaaatggaaaatataaaataattatt
gactatgataacaaccttgtaacctatgagaagcaagatttaaatcaaataacactctct
tatgcctgctctattcataaggcccaaggttcagaatttgataatattataattccattt
atagataattataattttatgttaaataaaaatcttacttatactgcagttactcgagcc
aaaaataaactgattttatgtggaaatcctaatgtgttctataaatcaatagaaccaaat
aatactgttacaagacaaacagctttgtgctggtttttcacaacgaataacaatttagat
aaaacagaaattatccttgaagaagattatattttaaattatcaaaatattaacaatata
gatcctatgattggtatggatgacattaaaccttcagacttcttataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (25)   
   Pfam (25)   
All databases (33)   

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