KEGG   Geoalkalibacter subterraneus: GSUB_01295
Entry
GSUB_01295        CDS       T03585                                 
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
gsb  Geoalkalibacter subterraneus
Pathway
gsb03030  DNA replication
gsb03430  Mismatch repair
gsb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gsb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GSUB_01295
   03430 Mismatch repair
    GSUB_01295
   03440 Homologous recombination
    GSUB_01295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsb03032]
    GSUB_01295
   03400 DNA repair and recombination proteins [BR:gsb03400]
    GSUB_01295
Enzymes [BR:gsb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GSUB_01295
DNA replication proteins [BR:gsb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GSUB_01295
DNA repair and recombination proteins [BR:gsb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GSUB_01295
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 AAA AAA_22 RuvB_N AAA_5 AAA_2 AAA_16 AAA_14 AbfS_sensor AAA_19 AAA_24 AAA_30 Glyco_tranf_2_5 AAA_assoc_2 DEAD T2SSE Mg_chelatase AAA_18 nSTAND3 TsaE PIF1
Other DBs
NCBI-ProteinID: AJF05483
UniProt: A0A0B5FDW4
Position
272987..274759
AA seq 590 aa
MSYLVLARKWRPQTFSDLIGQEHVSRTLGNAIRTDRVHHAFLFTGARGVGKTSAARIFAK
ALNCEQGLSDTPCNQCPTCVEITNGHSVDVLEIDGASNTGVDDVRELRESIRYLPSRARY
KIFIIDEVHMLSNSAFNALLKTLEEPPPHAKFVFATTEPHKIPATILSRCQRFDFRKIAL
PHVAERLRYIVDQEGIRVSDHALALIARRGEGSMRDALSALDQVIAFCGEEVRDEDILTL
FGQVERRILLNAIEAILRRDPRRALDVVRRVDDQGQALRPFCGQLVESFRTLVLLKVADD
ACDLVDATPEELEEFRVLIEMVSLEDLQRILTLLMKVVGELPASSFPRLTLEMALVRLTA
LPPAREVGALIRKMEDFERRLGGGEALRSSTPSTSGGTPPLPDPPSDPVRRSAPSERESS
AVPVPPPVEPSSAPSPSSPRQQSPPDRAGAKGRNWQGLVDKIRKVKPLLASFLEHGSLVS
SELPHLEIAFPAGSFYLEQLKDAEKLAQLEKLATQYFEQAVKLKVSILDGNGAAPPPLVE
ERRARQESRRDQLRREALDHPKIRTVLEIFGGDVKEVKPLAPTQGEPSSE
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgtcctacctggtactggcccgcaaatggcgaccgcagacgttctccgacctgatcggg
caggagcacgtcagtcgcaccctcggcaatgccatccgcaccgaccgggtgcaccacgct
tttctgtttaccggcgcgcgcggcgtcggcaaaacctctgctgcgcgcattttcgccaaa
gcccttaactgcgaacagggcctcagcgatacgccctgcaaccagtgccccacctgcgta
gaaatcaccaacggtcacagcgtcgatgtccttgagatcgacggcgcctccaataccggc
gtcgatgacgtgcgcgagttgcgcgaaagcatccgctatctgccttcgcgggcgcgctac
aagatcttcatcatcgacgaagtccatatgctctccaacagcgccttcaacgccttgttg
aagaccctcgaagagccgccgccgcacgccaaatttgtctttgccaccaccgagccgcac
aagattcccgccaccattctgtcgcgctgtcaacggttcgacttccgcaagatcgccctg
ccgcacgttgccgagcggttgcgctacatcgtcgaccaggagggcatccgcgtctccgat
catgcactggcactgattgcgcggcgcggcgaggggagcatgcgtgacgcactctcggcg
cttgatcaggtgatcgctttctgcggcgaggaggtccgggatgaggatatcctgactctt
ttcggacaggtcgaacggcgcattcttctcaatgccatcgaggcgattctgcgccgagac
ccccggcgtgcccttgatgtggtgcgccgtgtcgacgatcagggccaggccctgcgcccg
ttctgcgggcagctggtggagtcctttcgcaccctggtgctgctcaaggtggcggatgat
gcctgcgaccttgtggatgcgactcctgaagagcttgaagaatttcgggtcctgattgag
atggtctctcttgaggatctgcagcgcattctcactctccttatgaaagtggtcggcgag
ttgcccgcttcgtcctttccgcgcttgacgctggaaatggcgctggttcggttgacggct
ctgccgcccgcccgggaggtgggcgcgctgattcgcaagatggaggatttcgagcggcgc
ctgggggggggcgaggcgcttcgaagcagtacgccttccacatccgggggcacgccccct
ctgccggacccgccgtccgatcctgttcgccgttccgctccgtcagagagggagtcttcg
gctgtgcccgtaccgccgccggtagaaccctcttccgcaccgtcgccttcgtcgccccgg
cagcagtcgccgcccgaccgcgctggggccaagggccgcaattggcaggggctggtggac
aaaatccgcaaggtcaaaccgctgcttgccagctttctcgagcatggcagcctggtttcc
tccgagcttccgcatcttgagattgcttttcccgccggttctttttatcttgaacagctc
aaggatgccgaaaaactggcccagctcgaaaagctggctacccagtatttcgaacaggcc
gtgaagttgaaagtatccatccttgacggcaacggggcggccccgccgccgctggtggag
gagcgtcgtgcccggcaggaatcccggcgtgaccagttgcgcagggaggcgctcgatcat
ccgaaaatcaggacggtgctggagattttcggtggtgacgtcaaagaagtcaagccactg
gcccctactcagggtgagccgtcttcggagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (31)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (66)   

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