KEGG   Glycine soja (wild soybean): 114367892
Entry
114367892         CDS       T06057                                 
Name
(RefSeq) rRNA biogenesis protein RRP5-like isoform X1
  KO
K14792  rRNA biogenesis protein RRP5
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gsj03009]
    114367892
Ribosome biogenesis [BR:gsj03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    114367892
SSDB
Motif
Pfam: S1 Spt6_S1 Suf NRDE-2
Other DBs
NCBI-GeneID: 114367892
NCBI-ProteinID: XP_028180936
Position
9:complement(18815186..18840766)
AA seq 1911 aa
MAPHSKKPQKKNDSVDKPKIDKASKKIFKPKKREQNIAVAAAKSEALSLPLEDEVPDFPR
GGEFSAKGRNDYDEFGAEDPSKKTRKKKKGKNASGKSNEAADDWGSLSGNGITGKLPRRV
NKITLRNITPGMKLWGVVAEVNEKDLVVSLPGGLRGLVHASDAVDPIFDDKIEVGEIFLS
GVFCVGQLVSCVVLRLDDDKKEKGSRKIWLSLRLSLLHKNYNLDVVQEGMVLAAYVKSIE
DHGYILHFGLPFFMGFLPKNSSAEGWGGEVKIGKLLQGLVRSIDKVRKVVYLSSDPDTIT
KSVTKDLRGLSIDLLVPGMLVNACVKSILENGVMLSFLTYFTGTVDLFHLQNIYPGKNWK
DKCSESQKVVSRILFIDPSSRAVGLTLNPHLVQNRAPPSHVKIGDIYDNSKVVRVDRGLG
LLLEVPSIPEPTPAFVSISDIAEEIPKLEKKYKEGNHVRVRILGLRYLEGIATGVLKASA
LEEEVFTHSDVKPGMVVKAKILSVDSFGAIVQIPGGVKALCPLRHMSELEISKPGKKFKV
GAELVFRVLGCKSKRVTVTHKKTLVKSKLGIISSYADATDGLITHGWITKIEVHGCFVRF
YNGVQGFAPRSELGLEPGADPGTVYNVGQAVKCRVISCIPASRRINLSFIIKPTSVSEDD
MVTLGSLVSGAVDRITSNAVVVYVNASGFSRGTISMEHLADHHGQAILMHSVLKPGYNFD
QLLVLDVKGNNLILSAKSSLIKHAQQIPADINQIHPNSVVHGYICNLIESGCFVRFLGHL
TGFAPRNKAADDQKSNILEAYYIGQSVRSNISNVSSETGRVTLSLKQTACSSTDASFIQD
YFLMDDKIARLEYCGSGASDTKWDEGFNIGMVAKGKVKAVEDVGLVISFEHYNDVFGFIA
NYQLAGTILESGSIVEALVLDVGKADKLVELTLKPEFINRSKESSISRTNKKKRRREASK
DLVLHQTVNAVVEIVKENYLVLSIPENDYTIGYASVSDYNAQRFPHKQYQNGQSVVATVM
ALPSPETSGRLLLLVDVVNETSSSSKRTKKKSSYKVGTLVEAEITDIKTLELKLKFGFGL
YGRIHITEVYYGNVLENPFSSYKVGQTVTARIVAKPNESDGNRKGSQWELSVRPEMVTGS
SDIDDVSENLEFKIGQCVAGYVYKVESEWVWLTISRNVRAQLYILDSATEPSELEDFQNR
YHVGQPVSGHILSVNMEKKLLRLVVRPFSTLSCGTSEEPLTNVVDKDLTAYVHEGDILGG
RVSKILPGVGGLLVQVGPRTYGKVHFTELADTWVPDPLSGYHEEQFVKCIVLEVSHTVKG
TIHVDLSLGSSNVKLSQDSAVNANSKCVEKIEDLHPDMIVKGYIKNVTSKGCFIMLSRKI
DAKILLSNLSEQYVQEPEKEFPVGKLVIGRVTSVEPLSNRVEVTLKMSTAPNIPKSEIID
LSKFHVGDVVSGRIKRVESFGLFIAIDNTNMVGLCHISEISDNRIENIEANYRAGERVKA
RILKVDEERHRISLGMKNSYMRGETVLQIPSKEESDEPIVDGMKSITSMNSSLFGTSNID
VEDEINQFPILSQAQERADIPPLDVALDDFDQFDANNANSQSEEHANEEDIVNEKHKRRE
KKKAKEEREKQIRAAEERLLEDDVPRTADEFERLIRSSPNSSFTWIKYMDFMVSMADVEK
ARSIAERALRTINIREENEKLNIWKAYFNLENKYGNPREEAVMKVFQRALQYNDPKKVYL
ALLGMYERTEQHNLADELLNKMTKKFKHSCKVWLRRIQSLLKQNKDGIQPVIDRASLSLP
KHKHIKFFSQTAILEFKVGFPDRGRSMFEKILREYPKRTDLWSVYLDQEIQHKDEDIIHA
LFERAVSLSLPPKKMKFLFKKYLDYEMSQGDQERIESVKRKAIEYVESLNN
NT seq 5736 nt   +upstreamnt  +downstreamnt
atggcaccgcattcaaaaaaaccgcagaagaagaacgactctgtagacaaaccgaaaatc
gataaagcctctaagaaaatattcaaaccgaaaaagagggaacaaaacatcgccgtcgcc
gccgcaaagtccgaagcactctctctgccactagaagacgaggttcccgatttccctcga
ggcggagaattttccgcgaagggtaggaatgattatgatgagtttggcgccgaggatccc
tccaagaagacgaggaagaagaagaaggggaagaatgcgtcgggtaagagtaatgaagcc
gcagatgactggggctcgctttccggcaacggtatcaccggaaagttgccgcggcgtgtg
aataaaattactctcaggaatataactcctggaatgaagctttggggtgttgttgctgaa
gtaaatgagaaagaccttgtagttagtttaccagggggtttacgtggtttagttcacgct
tcagatgcggtagatcctatttttgacgacaaaattgaggttggggaaattttcctttct
ggtgtattttgtgttgggcagctggtttcttgtgttgtactgagattggatgatgacaag
aaagagaaaggaagcaggaaaatttggctttctttgcgtctttctttgttgcacaagaac
tacaacttggatgttgttcaggaaggcatggtccttgctgcatatgtgaagagtattgaa
gatcatggttacattcttcattttggtttaccttttttcatggggttcttaccaaaaaac
agctctgctgaaggctggggtggtgaagtaaaaattgggaaacttctgcagggtttggtt
agaagcattgataaagttcgtaaagtggtttacttgagttctgaccctgatacaataacc
aaaagtgtgaccaaggacctcagaggtttatcaattgatcttctagttccaggaatgctg
gtaaatgcctgtgtgaagtcaatccttgagaatggtgttatgttatcatttctcacatac
ttcacaggaactgttgatctgtttcatttgcaaaatatttatcctggaaaaaattggaag
gataagtgcagtgaatctcagaaggttgtttctcggatattattcattgatccatcaagt
agagctgttggtttgacactgaatccacatcttgttcagaacagggcccctccttctcat
gttaaaattggagatatatatgacaactcaaaagttgttagggtggatagaggattagga
ctattgcttgaagttccatcaattccggagccaactccagcttttgtcagcatatctgat
attgctgaggagatcccaaaacttgagaagaagtacaaagaaggaaatcatgttcgagtt
cggattcttgggttaagatatttggaaggaattgctacaggagttttgaaggctagtgct
ttagaagaggaagtgtttactcattctgatgtcaagcctggcatggtggtgaaggctaag
attctttcagttgacagctttggcgctatagtgcaaattccaggtggtgtgaaggcactt
tgtcctcttcgacatatgtctgaattggaaatttcaaagcctggaaaaaaatttaaggtg
ggagctgaattggttttccgtgtgcttggttgcaagtcaaaacgagtgacagttacacac
aagaaaacccttgttaaatcaaaacttgggattattagttcatatgctgatgcaaccgat
ggtttgataacccatggatggataacaaagattgaagttcatggatgctttgtacggttt
tacaatggggtccaaggatttgctcccagatctgaacttggattagagccaggtgctgat
ccaggtacagtgtacaatgttggacaagctgtcaaatgccgggtcataagttgcattcct
gcttcacggaggatcaaccttagtttcataataaagcccacaagtgtttctgaagatgat
atggttacgttgggtagccttgtttcaggagctgttgacagaataacatctaatgctgtt
gttgtttatgtcaatgcaagtggtttctcaaggggtacaatatccatggagcacttggca
gatcatcatgggcaagctattttgatgcactcagtattgaaacctggatataattttgat
caactgctggttctagatgttaagggaaacaatttgatcctgtctgccaaaagttctctt
attaaacatgctcagcagattcctgcagatatcaatcagatacatcctaactctgttgtg
catggctatatatgtaacttaattgagtctggctgctttgttcgtttccttggtcattta
accggctttgctcctagaaataaggctgcagatgaccagaaaagcaatattttggaagct
tattacattgggcaatcagttcgcagcaacatatccaatgttagtagtgaaactggtaga
gtaacactctctctaaagcagacagcttgttcttcaactgatgcatcatttattcaggac
tactttctcatggatgacaagattgcaaggttggaatactgtggctctggtgcatctgat
acaaagtgggatgaaggatttaacattggtatggttgcaaaaggcaaagttaaggctgtt
gaggatgttggacttgttataagctttgaacattataatgatgtttttggttttattgcc
aattatcagttggctggaactattttggagagtggctctatagtggaagcattggttctt
gatgttggaaaggcagacaagcttgttgagttaactctaaaaccagagttcattaataga
tctaaagaaagttccataagtcgtaccaacaagaagaaacgtcgaagggaggcatcaaag
gacttggtattacatcagactgtgaatgcagtagtggaaattgtaaaagaaaattacctg
gttctatcaattccagaaaatgattacactataggatatgcatcagtatcagactataat
gctcaaaggtttcctcataaacaataccaaaatgggcagagtgttgttgcaactgttatg
gctcttccaagtcctgaaacatcaggaaggttgctcttacttgtcgatgtggtcaatgag
acatcatctagttctaaaagaaccaagaagaagtctagctacaaagtgggaactctggtt
gaggcagagattactgacatcaaaacgcttgaactgaagctgaagtttggatttggtcta
tatggccggattcacataacagaggtatattatggaaatgttttggaaaatccattctct
agctacaaagttgggcaaacagtgacagcaaggattgttgcaaaacctaatgagtcagat
ggcaatcggaagggctctcagtgggagctatcagtcagacctgaaatggttacaggttcc
agtgatatagatgatgtatctgaaaatcttgagtttaaaattgggcaatgcgtggctggt
tatgtatataaagtagaaagtgaatgggtctggttaacaatatcgcgaaatgtaagggct
cagctatatattcttgatagtgctactgaacccagtgagcttgaggatttccagaatcga
tatcatgttggacaacctgtttctggtcatattctaagtgtcaacatggagaagaagcta
ttgcggttggttgtgcgccccttttctactctttcttgcggaactagtgaagagccacta
actaatgttgtggataaggatttaacagcatatgttcatgaaggagatattttaggtgga
agggttagtaaaatacttccaggtgttggtggattgcttgtccaagttggtcctcgcaca
tatggaaaagtacattttactgaacttgcagacacatgggtgcctgatccgttgtctgga
tatcatgaagagcagtttgtcaaatgtatagtgcttgaagtcagccacactgtcaagggt
actattcatgttgacttgtcattgggatcttccaatgtgaagctttcccaggattctgct
gtgaatgctaacagcaaatgtgtggagaagattgaggatcttcatcctgatatgattgta
aagggttatattaagaatgtcacatcaaaaggttgcttcattatgctctcacgaaagatt
gatgccaaaattcttctgtccaatctttccgaacaatatgttcaagaacctgagaaagaa
tttcctgttggaaaacttgtaattggcagggttacatctgtggagcctctttcaaatcgt
gttgaagttacactgaagatgtcaacggctcccaatatacccaaatctgagattattgat
ttgagtaaatttcatgttggagatgttgtatctggcaggattaagcgggttgagtcattt
ggtttattcattgcaattgacaacacaaacatggttgggttatgccatatatcagaaatt
tctgataaccgtattgagaacattgaagcaaactatagagctggagagagagtaaaggca
agaatattaaaggtggatgaagaaagacacagaatttctttgggaatgaagaattcatat
atgaggggtgaaaccgtgcttcaaataccatccaaggaagaatcagatgaacctattgtg
gatggaatgaagtctataacttctatgaatagtagtttgtttggaacctcaaatattgat
gttgaggatgaaattaatcaattcccaattctttcacaagcacaagaaagggcagacatt
ccaccacttgatgttgcccttgatgactttgatcaatttgatgcaaataatgctaacagt
caaagtgaagaacatgcaaatgaagaagacattgtaaatgaaaaacataagagacgtgaa
aagaagaaagcaaaggaggagagggagaagcaaataagggctgctgaggaaagattactg
gaggacgatgtccctagaactgctgatgagtttgaaaggctgattagaagctctcctaat
agcagtttcacctggataaaatatatggatttcatggtttctatggctgatgttgagaaa
gcccgctcaattgctgaaagggctttgaggacaataaatatccgagaagagaacgagaag
cttaacatctggaaggcatactttaatttggaaaataagtatggaaaccctagagaggag
gctgttatgaaagtattccaaagagctctacaatacaatgatcccaaaaaggtttaccta
gcactcttgggaatgtatgagaggaccgagcagcataatttagccgatgaacttctcaat
aaaatgacaaagaagttcaagcattcatgcaaagtttggttgaggcgtatacaaagtctt
ttgaagcaaaacaaggatggaatccaaccggtcattgatcgagcttcattaagccttcct
aaacacaagcatattaaatttttctctcagacagcgattcttgaattcaaggttgggttt
ccagatcgagggcgatccatgtttgaaaaaatcctacgggagtacccaaagagaacagac
ttatggagtgtttatcttgatcaagaaattcaacataaagacgaagatatcattcatgca
ctgtttgaaagggctgttagtctgagcctcccacctaaaaagatgaagttcttattcaaa
aagtatcttgattatgagatgtcccaaggtgatcaagaacggattgaatctgtgaagagg
aaagcaatagaatatgtcgagagtctaaacaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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