KEGG   Glycine soja (wild soybean): 114371088
Entry
114371088         CDS       T06057                                 
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
  KO
K12893  serine/arginine-rich splicing factor 4/5/6
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114371088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsj03041]
    114371088
Spliceosome [BR:gsj03041]
 Common components
  Common spliceosomal components
   SR proteins
    114371088
SSDB
Motif
Pfam: RRM_1 Nup35_RRM_2 RNA_bind RRM_5 Nup35_RRM DUF2129
Other DBs
NCBI-GeneID: 114371088
NCBI-ProteinID: XP_028184297
Position
10:complement(48349867..48353993)
AA seq 374 aa
MQQGKMRPIFCGNFEYDARQSELERLFRRYGKVDRVDMKSGFAFIYMEDERDAEAAIRAL
DRVEFGRKGRRLRVEWTKHERGVRRPASSRRSSAIGRPSKTLFVINFDTYHTRTRDLERH
FEPYGKIVSVRIRRNFAFVQYESEDDASRALEATNMSKLLDRVISVEFAVKDDDDRRNGY
SPERGRDRQRDRSRDGRRSPSPYRKERGSPDYGRGPSPYQRERGSPDYGRDRSRSRSPPR
RERASPAYGRRSISPYRREREGSEPVRDSSRSPYHKERGRTDHGISPSQSPEGRGRKSPQ
NGHGSSRSPRDTGKTSPENGHGSGSPDEKGNPSPYNGYGGSPNTVPDPRDSPNYGGPESP
MHERYHSQSPPAEE
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgcaacaagggaaaatgaggcctattttctgtggaaattttgaatatgatgcccggcag
tcagagctggagcggctttttagacgatatgggaaggttgatagggtggatatgaagtct
ggatttgcttttatctatatggaagacgagagagatgctgaggctgcaattcgtgctctt
gatcgagtagaatttggtcggaagggacgcagactccgtgtggaatggacaaagcatgaa
cgtggtgttagaaggcctgctagttcaagaagatcttcagctattgggaggccatcaaag
accttgtttgtaattaattttgatacataccataccagaacaagggacttggagaggcac
tttgaaccatatggaaagattgtcagtgtgaggatcagaaggaattttgcttttgttcaa
tatgaatcagaggatgatgctagcagagcactggaagctacaaatatgagcaagttactg
gatcgagttatttctgtcgagtttgctgttaaagatgatgatgataggagaaatggatat
agccctgagagaggccgtgatcgtcaacgtgatagaagccgtgatggaaggcgatcaccc
agtccttatcgtaaagaaaggggtagtcctgattatggtcgtgggcccagtccatatcag
agagagaggggtagccctgactatggccgtgaccgtagccgtagcagaagcccccctagg
agggagagagctagccctgcttatggacgtagaagcattagtccatatagaagagaaagg
gagggttctgaacctgttcgtgactccagccgcagtccttatcacaaagagcgagggaga
actgaccatggcatttctccttcgcagagtcctgaaggaagagggaggaaaagcccccaa
aatggtcacggttctagccgtagtcctcgtgatactgggaagactagccctgaaaatgga
catggctctggaagtcctgatgaaaaagggaatcccagcccttacaatggttatggaggg
agcccaaatactgtgcctgatcccagggacagtcccaactatggtggtcctgaaagtccc
atgcatgaaagataccacagccagtcaccccctgcagaagaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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