KEGG   Glycine soja (wild soybean): 114377003
Entry
114377003         CDS       T06057                                 
Name
(RefSeq) flowering time control protein FY-like isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114377003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114377003
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     114377003
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 eIF2A NBCH_WD40 WD40_like WDR54 PROPPIN
Other DBs
NCBI-GeneID: 114377003
NCBI-ProteinID: XP_028191165
Position
11:complement(38810289..38823526)
AA seq 713 aa
MMYNDPQQQQQQHQYQQQQQQQHFHHQPPGPEFHRGPLPPSLPPPVMRQGSASSTNLAPE
FHHPGPGGPPPPHYDAHSDIHGAKRIRKLTQRKAVDYTSTVVRYMQIRMSQRDSRDRTVL
QPTSAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGE
FTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAH
KESVRDLSFCRTDLKFCSCSDDTTVKVWDFARCQEECSLTGHGWDVKSVDWHPTKSLLVS
GGKDNLVKLWDAKTGRELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKLYDIRAMKEL
ESFRGHRKDVTTLAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWH
PIGYLLCSGSSDHTTKFWCRNRPGDPARDRFNTGMQGYAEQSPVAGRTGGNFPIAEGPTT
PGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLINA
NQQQPYQQNPQQMPQHQHQALPQQMGSLPMPPNMQQLQHPSHSPFPNMPRPPPQMPIGMP
GSIPGISSVPTSHPMPMPGPMGMQGAMNQMGSPMPQGPYVGMNQMHSGSLPTSGGPPLGG
FPGNLPNMQGPSNANYPQGASFNRPQGGQMPLMQGYNPYQSGNQSGMPPNAQP
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgatgtacaatgatcctcagcagcagcagcagcagcaccagtaccagcaacaacagcag
cagcagcatttccaccaccagccgccgggtccggagttccaccgcggaccgctgccgccg
tcgcttcctccgccggtgatgcggcaaggctccgcctcgtcgacgaacctcgcccctgaa
tttcatcatcccggccccggaggacccccgcctccccattacgacgctcacagtgatatt
catggtgcaaaaagaatacggaagcttactcaaaggaaagcggttgattatacaagcaca
gttgtgcgttatatgcagattcgtatgtcgcagcgggattcaagggataggacagtactg
caacccacgtcggcagcagcaattgatatgttgccagcagttggctatccagacaatcca
tccacaagctttgctgctaaatttgttcatacatctctaaataaaaatcgttgcccaatt
aatcgtgttctttggactccaacaggccggcgacttattaccggttcacagactggggaa
ttcactctttggaatggacaatcttttaattttgaaatgattcttcaggcacatgatcaa
gcaatcagatccatggtctggagtcataatgacaactggatggtctctggtgatgatgga
ggcgcaataaagtattggcagaacaacatgaacaatgttaaagccaacaaatctgctcat
aaagaatcagtccgtgacttaagtttctgtaggacagatttgaagttctgctcgtgctct
gatgataccacagttaaagtttgggattttgcacgctgtcaagaagagtgttcattaacc
ggccatggttgggatgtgaagagtgttgactggcatcctacaaaatctctattagtatca
ggtgggaaggacaatctagtgaagctttgggatgctaaaacagggagagagctttgttca
tttcatggccacaaaaacactgtgctgtgtgtcaaatggaatcaaaatggcaactgggtg
ctaacagcttcaaaggatcaaataataaagctttatgacataagagcaatgaaggaactt
gaatcgttccgtgggcatcgcaaggatgttactactttggcatggcatccattccatgaa
gagtactttgtcagtgggagttacgatggttccatcttccattggcttgttgggcatgaa
actccacaaattgaaatttccaatgctcatgataataatgtgtgggaccttgcatggcat
cctattggctaccttctgtgcagtggcagcagtgatcatacaacaaagttttggtgcaga
aataggccaggagaccctgctcgtgatagatttaacactggcatgcaaggatatgctgag
caaagtcctgttgctggtcggacaggtggtaattttccaatagctgaaggcccaacaact
ccaggaccatttgcccctgggttgactcgaaatgagggtaccattccaggtgttggagtt
gcaatgcccttatctattccttctcttgacatgcctcaaggggagcagaagcagccccat
cctgtttcaatgggtgctcctcctcttcccccaggtccacatccctccctaattaatgcc
aaccaacagcaaccataccaacagaatcctcagcagatgccacaacatcaacaccaggct
ctaccacagcagatgggttctttgcctatgcctccaaatatgcaacaactacagcaccct
tcccattcacccttcccaaatatgcctcgccctccaccccaaatgcctattggcatgcca
ggatctataccagggatttcatcagtgcctacatcacatccaatgccaatgccaggtcca
atggggatgcaaggggcgatgaatcagatgggttctccaatgccacaaggtccttatgta
ggcatgaatcaaatgcattcaggatccttgcctacaagtggagggccacctcttggtggt
tttccaggaaacttgcctaatatgcaagggccatcaaatgctaattatcctcaaggtgct
tcatttaacagacctcagggtggccaaatgcctctgatgcaagggtataatccttaccag
tctggtaatcaatctgggatgcctccaaacgcacaaccatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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