KEGG   Glycine soja (wild soybean): 114385300
Entry
114385300         CDS       T06057                                 
Name
(RefSeq) THO complex subunit 4B-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03013  Nucleocytoplasmic transport
gsj03015  mRNA surveillance pathway
gsj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114385300
  09122 Translation
   03013 Nucleocytoplasmic transport
    114385300
   03015 mRNA surveillance pathway
    114385300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114385300
   03041 Spliceosome [BR:gsj03041]
    114385300
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114385300
    TREX complex
     114385300
Spliceosome [BR:gsj03041]
 Complex C
  Other components
   EJC/TREX
    114385300
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114385300
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 114385300
NCBI-ProteinID: XP_028201118
Position
2:complement(8285807..8288251)
AA seq 266 aa
MAGGIDMSLDDIKKRSAAAVASRRRFTVVHNPARTTPYPIPQCLIGCQVRQQSMVALFPE
MVLEESGAAKIESGTKLYLSNLDHGVTNDDIKLLFSEEGELKSYTIHYDQSGRSKGTAEV
VFVRHSDALLAIKKYNNMRLDGKPLQIELVGTSLATPAVAPLCQNNLMGRPNDVHFSTRG
RVGDSGFHNDFAQGYLPRGRGEEKDHIRKVSFRDLDHSFERFHRTQSQRSYAKVNGNFGK
VTAKDLDDDLERYHLEAKRIKKQNGK
NT seq 801 nt   +upstreamnt  +downstreamnt
atggccggcggcatcgacatgtccctcgacgacattaagaagcgttcagccgccgccgtg
gcttctcgccgccgattcacggttgttcacaacccggccagaacgacgccgtacccgatt
ccgcagtgtttgattggttgtcaggtaaggcaacagagcatggttgcattatttccagaa
atggttttggaggagtcaggtgcggctaagattgaaagtggcaccaagctctatttatct
aacttggatcatggagttaccaacgatgatatcaagctgctgttctcggaagagggtgaa
ttgaaaagctacactattcattatgatcagagtggaagatcaaagggaactgcagaagtt
gtgttcgtgaggcattctgatgctttattagccatcaagaaatacaacaatatgaggctt
gatggaaagccattgcaaattgagcttgttggaacaagtttggctactcctgctgtcgct
cctctttgtcaaaataacttgatgggaagaccaaatgatgtccattttagcacacgagga
agggttggcgatagtgggtttcacaatgactttgcacagggctaccttccaaggggccgt
ggagaagagaaggaccatattcgaaaggtgtcttttagagatcttgatcatagctttgag
aggtttcaccgcactcagagtcagagaagctacgcaaaagtaaatggcaattttggaaag
gtgactgctaaagatcttgatgatgacttggagaggtatcacttagaggctaagcggatt
aaaaagcaaaatggaaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

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