KEGG   Glycine soja (wild soybean): 114393500
Entry
114393500         CDS       T06057                                 
Name
(RefSeq) ATP-dependent RNA helicase dbp8-like
  KO
K03257  translation initiation factor 4A
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114393500
   03012 Translation factors [BR:gsj03012]
    114393500
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gsj04147]
    114393500
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     114393500
   mRNA cycle factors
    Stress granule specific factors
     114393500
Translation factors [BR:gsj03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    114393500
Exosome [BR:gsj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   114393500
  Exosomal proteins of bladder cancer cells
   114393500
SSDB
Motif
Pfam: DEAD Helicase_C WD40 ResIII NBCH_WD40 DUF2780 PQQ_3 CMS1 AAA_19 AAA_22
Other DBs
NCBI-GeneID: 114393500
NCBI-ProteinID: XP_028210658
Position
17:4039261..4049823
AA seq 854 aa
MCGDATNWDEDAYRETILKEREIQTRTVFRTAWAPPYTSNLDTLILASSDGSVASYSISS
SIAASKIKNPFGFVNADTDELLAEPNCFVQAHDGPAYDVRFYGDGEDALLLSCGDDGRIR
GWRWNEFSSSNYSVSSQGNDIKPVLDVVNPQHKGPWGALSPIPENNAIAVNTQGGSVFAA
SGDSCAYCWDVETGKVKMVFKGHMDYLHCIVARNSLDQIITGSEDGTTRIWDCKSGKCTQ
VIDPARDLKLKGSASWVGCVALDASESWLACSSGRNISLWNLPASECISKIPTRACVQDM
LFDNNQILTVGTDPLLNRFDMNGTILSQIQCAPSSSFSISLHPAGVMAVGGYGCLVDVIS
QFGSHMCTFHCQSWFLFITSLSLTHTHILASLSLRSAPAKRSSLSFSRLRGVDPRSSGNP
NSSSFTTEQRFFSLSIISTEVMAGLAPEGSQFDARQYDSKMSDLLSSDGQDFFTSYDEVY
DSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGIL
QQLDYSLTQCQALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVREDQRILSSGV
HVVVGTPGRVFDMLRRQSLQPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVF
SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVEKEEWKLDTLCDLYETLAI
TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL
ARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDEKMLFDIQKFYN
VQVEELPSNVAELL
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgtgcggtgacgccacgaactgggacgaagacgcatacagagaaaccattctcaaggag
agggaaatccaaacccgaaccgttttccgaaccgcttgggccccaccctacacctctaac
ctcgacactctcatccttgcctctagcgacggttccgtcgcatcctactccatctcttcc
tccatcgccgcctctaagataaaaaatccattcggtttcgtcaatgccgatacagatgag
ttgttggctgaaccaaattgcttcgttcaagcgcacgatggacctgcttacgatgtcaga
ttttatggtgatggcgaagatgctctgttgctgagctgtggtgatgatggtcggattcga
ggatggagatggaacgaattttcaagctcaaattattctgtttcttcccaaggaaatgat
atcaagcctgtacttgatgtggtgaatccccaacacaaaggtccttggggtgcgctttca
cctatccctgagaataatgctattgctgtcaatactcaggggggatctgtttttgctgca
tctggcgattcttgtgcatattgttgggatgtggaaactggtaaagtgaaaatggtattc
aaggggcacatggactatttgcattgtatagttgctcgcaactcattagatcagatcata
acaggttcggaggatgggacgactcgaatttgggattgcaaaagtggaaagtgtacgcaa
gtgattgatccagcaagagatttgaaattaaagggatctgcttcttgggttggctgtgtt
gctttagatgcaagtgaaagctggttggcttgcagtagtggacgtaatatatcactttgg
aaccttcctgcttcagaatgcatatcaaagattcctacccgtgcttgtgtacaagacatg
ttatttgacaataatcaaattttgacagttggtacagatcctctactcaatcgctttgac
atgaacggcactatcctttcacaaatacagtgtgctccttcgtcatctttttctatctcc
ttacatcctgcaggggttatggcagttggaggttatggatgtcttgttgatgttatctca
caatttggcagccacatgtgcacgtttcattgccagtcctggtttttatttatcacttct
ctctctctcacacacacacacatactcgcttccctctctctgcgttcggcaccagcgaaa
cgctcttcgttatctttttctcgactccgcggcgtagatccgaggagttcgggaaaccct
aactcatcttccttcacaacagaacaacgcttcttttccctatccatcatctcaactgaa
gtcatggctggactagcacctgaggggtcacagttcgatgctcgtcaatatgattccaaa
atgagtgacttactttcatctgatggacaggacttcttcacatcctatgacgaggtttat
gatagttttgacgctatgggtttgcaggagaatcttctcaggggaatttacgcatacggt
tttgagaagccatcagccattcagcaaagggggatagttcccttctgcaagggacttgat
gttattcaacaggctcaatctggaactgggaagacggccactttctgctctggtattctg
cagcaacttgactatagcttgactcaatgccaggccttggttttggcaccaactcgtgag
cttgctcagcagattgagaaagttatgcgggcacttggagattatcaaggtgtgaaggtt
catgcttgtgtgggaggtaccagtgtgcgtgaggaccagcgcattctatctagtggtgtt
catgttgtggttggtacccctggtcgtgtgtttgatatgctgcgccgacagtcacttcag
ccagaccacatcaagatgtttgtattggatgaggctgatgaaatgctttcccgaggtttc
aaggatcagatctacgatatatttcagctgcttccatctaagattcaagtgggagttttc
tctgccacaatgcctcctgaggcccttgagatcaccaggaagtttatgaacaaacctgtg
aggatccttgtgaagcgtgatgagctcaccttggagggtattaagcaattttatgtcaat
gttgaaaaggaggaatggaagctggacacactctgcgatctttatgagacattagctatc
actcagagtgtcatttttgttaacaccagaaggaaagttgattggttgactgacaagatg
agaagccgtgaccacacagtctcagcaacccacggagacatggaccagaataccagggac
attattatgcgtgaattccgttctgggtcttcccgtgtcttgataaccactgatcttttg
gctcgtggtattgatgtccaacaagtgtctctagttataaattttgatctcccaacacag
cctgagaactatctccatcgtattggtcgtagtgggaggttcggaaggaagggtgttgcg
atcaactttgtcacaaaggatgacgagaaaatgctgtttgacatccagaagttttacaac
gtgcaagttgaggagctgccttcaaatgttgctgagctcctttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (20)   

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