KEGG   Glycine soja (wild soybean): 114393577
Entry
114393577         CDS       T06057                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    114393577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsj03021]
    114393577
   03036 Chromosome and associated proteins [BR:gsj03036]
    114393577
Transcription machinery [BR:gsj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     114393577
   Coactivators
    SAGA/TFTC/STAGA complex
     114393577
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     114393577
    STAGA complex
     114393577
    TFTC complex
     114393577
    SAGA complex
     114393577
    SLIK complex
     114393577
SSDB
Motif
Pfam: WD40 TFIID_NTD2 NBCH_WD40 ANAPC4_WD40 Ge1_WD40 Nup160 WD40_like Nbas_N PALB2_WD40 Cytochrom_D1
Other DBs
NCBI-GeneID: 114393577
NCBI-ProteinID: XP_028210730
Position
17:complement(37660051..37680462)
AA seq 658 aa
MDEDQIEGCVSGYLKQKGFTQNDDQLQLTNTDSSLQPDTLNRAQLERGSARYHDGYGRLR
SWAYRSLDSYKHELLRVLFPLFIHCFMDLVAKGNLQEAWNFFNTFREDHEMMHSRDLQKL
ELVLSPTHFKEMEFAHSLRQSKFNIKICGYSYELLMQHLHSMQSTTIIGIINEHISFQVT
AGQPSSTSDDPEAVSLIGNIKDEANQINQKEILWGMFKDSAEDCVDKTGSLLSDTEKGEG
EGKEGENDEIKKRSIDGGKQGSSIKKAKKDKAGSATGKNAKPEANTVSAAPRIKPELPLP
TFSTDVELSILEDLRNRVQLSSVALPSVNFYTIVNTHNGLSCSSISHDGSLIAGGFSDSS
LKVWDMAKLEKQPTTSFSQGGNDTSQNEQNIGQNSGKRLCTLFQGHSGPVYAATFSPAGD
FILSSSADKTIRLWSTKLNANLVCYKGHNYPIWDVQFSPAGHYFASCSHDRTARIWSMDR
IQPLRIMAGHLSDVDCVQWHVNCNYIATGSSDKTVRLWDVQSGECVRVFIGHRSMILSLA
MSPDGRYMASGDEDGTIMMWDLSSGCCVTPLVGHTSCVWSLAFSCEGSLLASGSADCTVK
FWDVTTGIKVPRNEENRSGNTNRLRSLKSLPTKSASVYSLQFCRRNLLFAAGAIAKTG
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggatgaagatcaaatagaaggttgtgtgagtgggtacctcaagcagaaagggtttacg
caaaacgatgaccaacttcaactcaccaacaccgattcatctcttcaacccgacactctc
aatcgcgcccaattggagagaggttctgctagataccatgatgggtatggtagactaaga
tcatgggcatacaggtcacttgactcatacaagcatgagctgctgcgtgtgctttttcca
ctatttatccattgcttcatggatcttgtggcaaaagggaatcttcaggaagcttggaac
tttttcaatacctttcgtgaagaccatgaaatgatgcattcgcgagaccttcaaaagttg
gaactagttctttctcctactcattttaaggaaatggaattcgctcattcccttaggcag
agtaaattcaacataaagatatgtgggtattcttatgagctactgatgcaacatctacac
agtatgcaatccaccacaataattggtattatcaatgagcacattagcttccaagttaca
gctggacaacctagctcaacttctgatgatccagaagccgtttccctcattggaaacatc
aaggatgaagcaaaccagataaaccagaaagaaatactttggggaatgtttaaagactct
gcagaagactgtgtagataagactgggtccttgctttcagacacagaaaagggtgaaggg
gaaggcaaagagggagagaatgatgagattaagaaaaggtcaattgatggaggaaagcaa
ggtagttcaataaaaaaggcaaaaaaggacaaggctggcagtgcaacagggaaaaatgct
aaaccagaagctaacactgtatctgcagcacctcgcattaaaccagagctacccttgccc
acattttcaactgatgtagaactttccatcctagaagatttaaggaatcgtgtacaattg
agtagtgttgctctcccttcagttaacttctacacaattgtaaatacacataatggttta
agttgttcatcaatatcacatgatggatcattgattgctggaggattttctgactcgtca
ctaaaggtctgggatatggcgaaacttgaaaaacaacccaccacttctttttcacaggga
gggaatgacacatcacaaaatgaacaaaatattgggcaaaatagtgggaaaagactgtgc
acattgtttcaaggtcattcagggccagtttatgcggctacttttagtcctgctggggat
tttattctttcctcttcagcagacaaaacaattcgattatggagtacaaagcttaatgcc
aatcttgtttgttacaagggtcacaattacccaatttgggatgttcagtttagtcctgca
gggcattattttgctagctgttcacatgatagaacagctaggatttggtccatggacaga
atacaacctttgagaataatggcagggcatttgtcagatgttgattgtgtgcagtggcat
gtcaactgcaactacattgctactggctccagtgacaaaacagttcgattatgggatgta
cagagtggggaatgtgttcgggttttcattggtcacaggagtatgattttatctttggca
atgtctccggacggtcgctatatggcatctggtgatgaagacggcaccatcatgatgtgg
gacctctctagtggctgttgcgtcacgcctttagtcggccacacctcatgtgtctggtca
ctcgctttcagttgtgaaggttctcttctagcatctggatccgcagattgcacagtcaaa
ttttgggatgtaactacgggtataaaggttccaaggaatgaagaaaatagaagtgggaat
actaacagactcagatcattgaaaagcttgccaaccaaatctgcttcagtttactctctt
cagttttgtcgaaggaatcttctatttgcagctggagctattgcaaaaactggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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