KEGG   Glycine soja (wild soybean): 114393822
Entry
114393822         CDS       T06057                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    114393822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gsj03009]
    114393822
Ribosome biogenesis [BR:gsj03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    114393822
SSDB
Motif
Pfam: WD40 Utp13 NBCH_WD40 ANAPC4_WD40 Ge1_WD40 WD40_like WDR54 UTP15_C RAB3GAP2_N
Other DBs
NCBI-GeneID: 114393822
NCBI-ProteinID: XP_028211083
Position
17:complement(6921651..6935832)
AA seq 879 aa
MEPLRLKTNYRCVPALQQFYTGGPFVVSSDSSFIACACGESIKIVDSATAAIRSTLDADS
ESFTALALSPDDRLLFSSGHSRQIRVWDLSTLKCVRSWKGHEGPVMCMTCHPSGGLLATG
GADRKVLVWDVDGGYCTHYFKGHGGVVSCVMFHSDPEKQLLFSGSDDGGDHATVRVWDIS
KTKKKNCIATLDNHSSAVTSLALSEDGWTLLSAGRDKVVTLWDLHGYSGKKTVITNEAVE
AVCVIGAGSPFASSLDLYQQNAKIHDGSEIFYFITVGERGIVRIWNSKGAGCIFEQKTSD
VTAGMDEDGSRRGFTSAVMLASDQGLLCVTADQQFLFYSLDFTEQLLQLNLTKRLVGYNE
EIVDMKFIGDDEKFLALATNLEQIRVYDLSSMSCSYVLSGHTEIVLCLDSCVSSSGKPLI
VTGSKDNSVRLWEPESANCIGVGIGHMGAVGAIAFSKRKRDFFVSGSSDHTLKVWSMDGL
LDNMTVPINLKAKAVVAAHDKDINSVAVAPNDSLVCSGSQDRTACVWRLPDLVSVVVFKG
HKRGIWSVEFSPVDQCVVTASGDKTIRIWAISDGSCLKTFEGHTSSVLRALFVTRGTQIV
SCGADGLVKLWTVKTNECVATYDHHEDKVWALAVGRKTEKLATGGGDAVVNLWFDSTAAD
KEEAFRKEEEGVVKGQELENAVSDADYTKAIQIAFELRRPHRLFELFAELCRKREAEDHM
DRALKGLDSEELRILFNYVREWNTKPKLCYVSQFVLFRVFCIFPPTDIVQIKGIGEYLEG
LIPYSQRHFGRIDRLVRSTFLLDYILSGMSVIEPQAQLTESKTELLLQSEIGIPDPDKEN
DTNEITASKKRKSNKSKHGSHKKVKNVAYNKVESIQLQA
NT seq 2640 nt   +upstreamnt  +downstreamnt
atggagcccctacgattgaagaccaactaccgctgcgtccccgctctgcagcagttctac
actggcggccccttcgtcgtctcatcggactcctccttcatcgcctgcgcctgcggcgag
tccatcaagatcgtcgattcagccactgccgccatacgctccaccctcgatgccgactct
gaatccttcaccgccttggctctcagccccgacgaccgcctcctcttctcctccggccac
tcccgccaaatcagagtctgggacttgtccacgcttaagtgcgtccgctcctggaagggt
cacgagggtccggttatgtgcatgacgtgtcacccttctggagggttgcttgctactggt
ggagcagataggaaggttctagtgtgggatgtggatggtggttactgcactcactacttt
aaaggtcacggtggtgttgtttcttgtgttatgttccattccgatcctgagaagcagctt
cttttttctggcagtgatgatggtggtgatcatgcaactgtaagggtttgggatatttcc
aagaccaagaaaaagaactgcattgcaacactagataatcatagctcagcagtgacttct
ttggcattatctgaagacggatggacactgcttagtgctggaagagataaggttgtaaca
ttgtgggatcttcatggttatagtggcaagaagactgtcattacaaatgaggcagttgaa
gctgtttgtgtaattggtgctgggagtccttttgcttcatctctcgatttatatcagcaa
aatgcaaaaatacatgatggttccgaaatattctatttcattacagttggtgaaagaggc
attgtacgcatatggaattccaaaggtgcaggttgcatctttgagcaaaaaacttcagat
gttacagccggcatggatgaggatggctcacgtaggggtttcacttctgctgttatgctt
gcctcagatcaaggattgctttgtgtaactgcagatcagcagtttctgttttactctctg
gacttcactgaacagttgttgcaattaaatctaaccaaaagacttgtgggatataatgaa
gagattgtagatatgaagtttattggggatgatgaaaaattccttgctcttgctacaaat
cttgaacagattcgggtttatgacctttcatctatgtcatgttcgtatgtcttatctggt
cacactgaaattgttctatgccttgactcctgtgtatcaagttctgggaaaccactgatt
gttactggaagtaaagacaacagtgttaggttatgggaaccagaaagtgcaaactgcatt
ggagttggtataggtcacatgggagctgttggagccattgccttttcaaaaagaaagcga
gatttctttgttagtggcagtagtgatcatactcttaaggtgtggagtatggatggtctc
ttggacaatatgacagtgccaattaatttaaaagcaaaagctgttgttgcagctcatgat
aaagatataaattctgtagctgttgctccaaatgatagtttagtatgtagtggttctcag
gatcgtacagcttgtgtttggagacttccagatctagtatctgtagttgtatttaaaggt
cataaaagaggaatttggtcagtagaattttctcctgttgatcaatgtgtagtaacagca
tctggtgataagacaataaggatatgggctatatctgatggctcctgtttgaagacattt
gaaggacacacttcaagtgtgttaagagcattgtttgttactcgtggaacacaaattgtt
tcttgtggtgctgatggcttagtaaagctgtggactgtaaaaactaatgaatgtgttgct
acttatgatcatcatgaagacaaggtttgggccttggctgtaggcaggaaaacagaaaag
cttgcaacgggtggcggagatgctgttgtcaatttatggtttgactccactgcagctgac
aaagaagaggctttccgtaaagaggaagagggagttgtgaaaggtcaagagctagagaat
gctgtctcagatgctgactatactaaagcaatccaaattgcatttgaactgcgcaggcct
cataggctttttgagctatttgcagaactttgcaggaagagagaggctgaagatcatatg
gacagagcacttaagggcttggatagtgaagaacttcgtatattatttaactatgttcga
gaatggaatacaaaaccaaagctttgttatgtttctcagttcgtgcttttcagagttttc
tgcatctttcctccaacagatattgttcagattaaagggattggtgaatatcttgaaggt
cttatcccgtatagtcaaaggcattttggcaggatagatagacttgttagaagcacattt
ttgttagactacattctatcaggaatgtctgttattgaaccacaagctcaactgacagaa
tcaaagactgagttactgttgcagtctgaaattggcattccagatccggacaaagaaaat
gacactaatgaaattaccgcttcaaagaaaaggaaatcaaacaaatcaaaacatggttcc
cataagaaagttaagaatgtagcttacaacaaggtcgaatctatacaattacaggcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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