KEGG   Glycine soja (wild soybean): 114393934
Entry
114393934         CDS       T06057                                 
Name
(RefSeq) THO complex subunit 5B-like
  KO
K13174  THO complex subunit 5
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114393934
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114393934
   03041 Spliceosome [BR:gsj03041]
    114393934
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     114393934
Spliceosome [BR:gsj03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114393934
SSDB
Motif
Pfam: FmiP_Thoc5 ATP13 FHIPEP
Other DBs
NCBI-GeneID: 114393934
NCBI-ProteinID: XP_028211240
Position
17:40089642..40093151
AA seq 498 aa
MEDGDTTEEAVVVPVSNGDEQSFSHSSSRQRDSEEDSPHETLRNTKASIENIVAEILSLK
NQAKPKPLLTLRLRELLTQTFLHFVTLRQANRSILLEEERARTETERAKVPLELTTQKLQ
NLSYEKSQFVKAIKVCNDFKSKYPDIEVVSEEEFFRGAPQDMKDSVLSNHSEHNLVLKRL
NFELFQRKELCKLHDKLEQKRKTLLDTIANRKKFLSSLPSHLKSLKKASLPVQNQLGVQH
TKKLKRHHTAELLPPPLYVIYSQLLAQKEAFGESIDVEIIGSVKDAQAFSHHLAHKDTGI
STTVESPKLENNEPDEDGQRQSKRPRRFQGKESLDQAGIFQIHPLTVNLHVYDDEVTDLE
SAKLISLKFEYLMQLNIICVGNEASNIGSENDILSDLFPDDTGLELPHQSAKLCVGNAIM
FNGDRTARPYKWAQHLAGIDFLPEVAPLLLASRETSDSGEAAKGEDFITSLSQYRQQNRL
QTVLQKIRSRIKAQLALQ
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggaagacggcgatacgacggaggaggcggttgtcgttccggtctcaaacggcgacgag
caatcgttttctcattcttcctcacggcaacgcgattcggaggaggattctccgcacgaa
acgttgcgtaacacaaaagcttcaatagagaacatcgtagccgagattctctctctgaag
aaccaggcaaaacccaaaccactcctcactctccgactccgagagctcctcactcaaacg
ttcctccacttcgtcactctccgccaggcaaatcgctcgatcttgctggaggaggagcgc
gcaagaacggaaacggagcgtgcgaaggtgcctctggaactcaccacacagaagcttcag
aacctgagttatgagaagagtcaattcgtgaaagcgataaaggtgtgtaacgatttcaag
tcgaagtatcctgatattgaagtggtgtcggaggaagagttttttcgcggcgcgccgcag
gatatgaaggattccgttttgtccaatcacagtgagcataatctcgtgcttaagaggctc
aatttcgagctctttcagcgcaaagagctttgcaaacttcatgacaaactggaacagaaa
aggaaaacccttctggatacaattgcaaaccgaaagaagttcttatctagcctcccttca
catctcaagtctcttaagaaagcatcgttgccggtgcaaaatcaactaggagttcagcat
actaagaaactaaagcggcatcatacagcagagttgcttccaccacctctttatgtgatt
tactcacagttgttggctcaaaaggaggcgtttggagaatctattgatgtggagattata
ggaagtgtcaaagatgctcaagctttttcccaccatctagctcacaaggacactggcatt
tccaccactgtggagagtcctaaattggaaaacaatgaacctgatgaagatggtcagaga
cagagtaaaaggccaaggaggtttcaaggcaaggagagccttgaccaggcaggaatattt
caaattcacccacttactgtcaatctccatgtgtatgatgatgaggttactgatcttgag
tctgcaaaactcatttctctaaagtttgagtacttgatgcagttgaatattatatgtgtt
ggaaacgaagcatctaatattggttctgagaatgacatcttaagcgatttattcccagat
gacacaggtctcgagcttcctcaccagtcagctaagctctgtgtcgggaatgctataatg
ttcaatggtgatagaactgcacgtccttacaaatgggcacagcacctggcgggtattgat
ttcttgcctgaggtggctcccttgctgcttgctagccgtgaaacttcagacagtggtgaa
gctgccaaaggtgaagacttcataactagtctttcacaatatcgccaacaaaaccgatta
cagacagttctgcaaaaaattcgatcaaggataaaagctcagttggctcttcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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