KEGG   Glycine soja (wild soybean): 114400045
Entry
114400045         CDS       T06057                                 
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
  KO
K11583  serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114400045
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gsj01009]
    114400045
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114400045
   03036 Chromosome and associated proteins [BR:gsj03036]
    114400045
Protein phosphatases and associated proteins [BR:gsj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     114400045
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     114400045
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     114400045
SSDB
Motif
Pfam: EF-hand_13 EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_5 EF-hand_8 DUF4187
Other DBs
NCBI-GeneID: 114400045
NCBI-ProteinID: XP_028218094
Position
19:49469554..49479783
AA seq 537 aa
MSMEVVGDTASLEVDLLQLPEVSALALKSNLTFVETLFEQWLSLPESNRLVTSLLNEAKS
GAPLNVPGNRSSPNAASNSLPSMFPAGTAPPLSPRSTSGSPRIVKQRVGPSNLGSPLKVV
SEPVKEVIPQFYFQFGHPPPNDLKEQCLIRIDHLFHDHMDGLQIHEFKSVTKEVCKLPSF
FSTSLFRKIDNGTGVVTRKAFIDYWINGNMLTKDIATQIYTTLKQPQLKYLTQDDFKPVL
RELLANHPGLEFLQSTPEFQERYAETVIYRIYYYINRSGNGRLTLRELKRGNIIDAMLHA
DEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIFSQ
VPRRFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVLTRNELQFFYEE
QLHRMECMAQEPVLFEDILCQIIDMIGPEDESYITLRDLKGGKLSGSVFNILFNLNKFMA
FETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq 1614 nt   +upstreamnt  +downstreamnt
atgagcatggaggtcgttggcgatacggcgtcgttggaggtcgatttgttacagctccct
gaggtctccgctctcgcactcaaatctaacctaaccttcgtcgagacgctcttcgagcag
tggctttcgcttcccgaaagcaatcgattggtgacatcattgctaaatgaagcaaagtca
ggtgctcccttgaatgtcccagggaatcgctctagtccaaatgctgcaagcaattctttg
ccttccatgtttcctgctggcactgcaccacctctttcaccaaggagtacatctggctcc
cctcgcatagtgaaacagagagttggcccatctaatttgggttctcctttgaaggttgtc
agtgagccggttaaagaagtgatacctcagttctactttcaatttgggcatcctcctcca
aatgatctgaaagaacaatgcctgattagaattgaccatttattccatgatcacatggat
gggctgcagatacatgaattcaagtcagttactaaggaagtatgcaagctgccatctttt
ttttccacatctcttttcagaaagatcgataatggaactggagttgtgacaaggaaagca
tttattgattattggatcaatggcaacatgttgacaaaagatatagcaacccagatatac
acaactttaaagcaaccacagctcaagtaccttactcaggatgattttaaacctgtgcta
cgtgagcttttggcaaatcatccagggctggagttcctgcagagcacacctgagtttcaa
gagagatatgctgaaactgtcatatacagaatatattactacattaatagatcaggaaat
ggtcgtcttaccctgagggagctgaaacgtggaaacataattgatgcaatgttgcatgct
gatgaagaagaggacataaacaaggttttgaggtacttctcttatgagcatttttatgtt
atatactgcaagttttgggagctggatacagatcatgatttcttgatagacaaagagaat
ctcatcagatatggtaaccatgcgcttacctatcgaattgttgatagaatattttctcag
gttcccagaaggtttaccagtaaggttgagggaaagatgggttatgaagattttgtttac
ttcatactgtcagaagaggataaatcatctgagccaagtcttgagtattggttcaagtgc
attgatttggatggaaatggagttctgacacggaatgaactgcaatttttttatgaggag
caattgcatcgaatggagtgcatggcccaagaacctgtgctttttgaggatatactgtgc
cagattattgacatgattggacctgaggatgagagctatataactctgcgtgacctgaaa
ggtggtaaactctcaggaagtgttttcaatatcctgttcaatctgaataagttcatggcc
tttgaaactcgtgacccatttttgattcgtcaggaacgtgagaatcctacattgacagag
tgggatcgctttgctcatagagaatatattaggctttcaatggaagaagatgtagaggat
gcctctaacggtagtgcagaagtttgggatgaatcactagaggctcccttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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