KEGG T06057: 114400874

Glycine soja (wild soybean): 114400874

Entry

114400874         CDS       T06057

Name

(RefSeq) WD repeat-containing protein 3-like

K14556

U3 small nucleolar RNA-associated protein 12

Organism

gsj Glycine soja (wild soybean)

Pathway

gsj03008

Ribosome biogenesis in eukaryotes

Brite

KEGG Orthology (KO) [BR:gsj00001]
09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    114400874
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gsj03009]
    114400874
Ribosome biogenesis [BR:gsj03009]
Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    114400874

SSDB

Motif

Pfam:

WD40 Utp12 NBCH_WD40 ANAPC4_WD40 WDR54 WD40_like Nup160 PROPPIN CDtoxinA Rhamnogal_lyase

Other DBs

NCBI-GeneID:

114400874

NCBI-ProteinID:

XP_028219334

Position

19:44406842..44415803

AA seq 944 aa
MVKAYLRYEPAVSFGVIASVDSNISYDSSGKHLLSPALEKIGVWHVRQGLCTKTLTPSSS
SRGPSPSVTSIASSPSSLIAGGYGDGSIRIWDSDKGTCETTLNGHKGAVTTLRYNKAGSL
LASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVVFMSSGKKLVSSSKDKFLRVWDIDTQ
HCMQIVGGHHSEIWSLDVDLDERYLVTGSADNELRFYAIKHESVDGESVNGGEESSVQNK
WEVLRHFGEIQRQSKDRVATVQFNKSGSLLACQVAGKTVEIYRILDDAEAKRKAKRRVHR
KKEKKHSKEALEGIENGDRNNENKGDDSSVTHGPMETSNPTVTVADVFKLLHTIRAGKKI
CSISFCPVTPKNSLASLALSLNNNLLEFYSIEQGETKKTLAIDLQGHRSDVRSVTLSSDN
TFLMSTSHNAIKIWNPSTGSCLRTIDSGYGLCSLILPTNKYGLVGTKDGTIEIIDIGSGT
CVEVMEAHGGSVRSIAALPHKNGFVTGSADHDVKFWEYQIKQKPGQAAKQLTVSNVSTMK
MNDDALVVAISPDAKYIAVALLDSTVKVHFADTFKFFLSLYGHKLPVLCMDISSDGDLIV
TGSADKNIKIWGLDFGDCHKSIFAHADSVMAVQFVPKTHYVFSVGKDRLVKYWDADKFEL
LLTLEGHHADIWCLAVSNRGDFIVTGSHDRSIRLWDRTEEQFFIEEEKEKRLEEMFEADI
DNAFENKYVSKEEIPEEGAVALAGKQTQETLSATDLIIERLDIAEAEEKRIAEHQEEKNN
RNVAVFQANPLMNGLSPSDYVLSAFSDVHSNDLEQTLLALPFSDALKLLSYLKDWTSYSD
KVELVCRIGTLLLQTHYNQLLTTPAARPILTVFSDIFHERVKGWKDIFGFNLAAMDHIQQ
MMASRSDALFHDARSKLLEIRARQSKRLEERSDTGEVKRKKKKT

NT seq 2835 nt +upstreamnt +downstreamnt
atggtgaaggcctacctccgatacgagccggcggtgtcgtttggggtgatagcgtcggtg
gattccaacatttcatacgacagctccggcaaacacctcctctctccggcactcgagaaa
attggcgtctggcacgtgcggcagggcctctgcaccaaaaccctaactccttcctcttcg
tcgcgcggtccttctccctccgtcacctccattgcctcctccccttcctccctgattgct
ggtggttacggtgatggtagcataaggatttgggactccgataaaggaacgtgcgagact
acgttgaatggacacaagggagctgtcactactcttcgttacaacaaggctggctccttg
ctcgcctctggtagcaaggataatgatgtcattttgtgggatgtggttggcgagactggg
ctctttcgccttcgcggccaccgcgatcaggtgactgatgttgttttcatgagttctggg
aaaaagcttgttagttcctccaaagacaagttcttgagagtgtgggatattgatacccag
cactgtatgcaaattgttggtggccatcatagtgaaatatggtccctagatgttgatctg
gatgaaagatatctggtcactggttctgcggataatgaacttcgtttttatgccatcaag
catgagtctgtggatggggagtctgtaaatggcggtgaagaatcttctgttcaaaacaaa
tgggaagtgttgaggcattttggtgaaattcagcggcaaagtaaggatagagttgcaacg
gtccagttcaacaagtctggaagtctgctagcttgccaagttgctggaaagacggtagaa
atataccgcatattggatgatgctgaagcaaagcgcaaagcaaaacgaagggttcaccgt
aagaaagagaagaaacatagtaaagaagctttggaaggaatagaaaatggagacaggaat
aatgagaacaaaggagacgattcttctgtcactcatgggcccatggaaacaagtaacccc
acagttactgtggctgatgtttttaagctgttgcatactatcagagctggcaaaaagata
tgctctatttctttctgtccagtcactccgaagaattcactggctagtttagcgttgtcc
ctgaacaataatctacttgagttttactccattgaacaaggggaaaccaagaaaacactt
gctattgatctccaagggcaccgttctgatgttagaagtgtcacgcttagttcagacaac
acttttctgatgtcaaccagtcacaatgctataaagatttggaacccaagtactggctct
tgcctaaggaccattgattctgggtatggactgtgcagtttaattcttcccaccaacaag
tatggacttgttggaactaaagatggaaccatagaaattattgacattggaagtggtact
tgtgttgaagtaatggaagctcatggtggttccgttcgctcaattgctgcccttccacat
aaaaatggttttgtcacaggaagtgcagatcatgatgtgaagttttgggagtaccaaatt
aagcaaaaacccggtcaagctgctaagcaactcacagtgtcaaatgtcagtaccatgaaa
atgaatgatgatgctcttgtggttgcaattagccctgatgctaaatatattgctgttgct
ctcttggatagtactgtgaaggttcactttgcagacacattcaaattcttcctttcatta
tatggccacaagctgcctgttctgtgtatggatatctcatcagatggagatttaattgta
accggctctgcagataaaaatataaagatctggggtttggactttggtgactgtcataaa
tccatctttgcgcatgctgacagtgttatggcagtgcaatttgttcccaagacacattat
gtgttcagtgttgggaaagatcgcctagtaaaatattgggatgccgataaatttgagctg
ctcttgacacttgaaggacatcatgctgatatttggtgtcttgcagtcagtaatcgtggt
gattttattgtcactggatctcatgatcgttctatccgcctctgggatcgcactgaagag
cagtttttcattgaggaagaaaaggagaaaaggttggaggaaatgtttgaggctgatatt
gacaatgcatttgaaaacaagtatgtgtcaaaggaagaaataccagaagagggagctgtg
gctttagctgggaaacaaacccaggaaaccctttctgcaactgacttaattattgagaga
ttagacattgcagaagctgaagaaaagcgtattgcagaacatcaggaggagaaaaataac
agaaatgttgctgttttccaagcaaatccgcttatgaatgggctttcaccttctgactat
gttctaagtgcattttcagatgttcactccaatgatttggagcaaacattattggcttta
ccattttcagatgctttgaagcttctgtcgtacttgaaagactggacttcatactctgat
aaggttgagcttgtttgcagaataggtacgctgctgttgcagacacattacaaccagctt
cttaccacgccagctgcccgacctatcttgactgttttcagtgacatttttcatgaaagg
gtcaagggatggaaagacatctttggttttaaccttgccgccatggatcatattcagcaa
atgatggcttcaagatcagatgctctttttcatgatgcaagatcaaaactgctagagata
cgtgctcgacaatccaaacgtttagaagaaaggtctgatactggggaagtgaaacggaag
aagaagaagacataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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