KEGG   Glycine soja (wild soybean): 114403643
Entry
114403643         CDS       T06057                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03020  RNA polymerase
gsj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114403643
  09124 Replication and repair
   03420 Nucleotide excision repair
    114403643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsj03021]
    114403643
   03400 DNA repair and recombination proteins [BR:gsj03400]
    114403643
Transcription machinery [BR:gsj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     114403643
DNA repair and recombination proteins [BR:gsj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114403643
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L Enterotoxin_b
Other DBs
NCBI-GeneID: 114403643
NCBI-ProteinID: XP_028222538
Position
20:1998776..2002389
AA seq 320 aa
MEGGVSYARMPRVKIRELKDDYAKFELRDTDASIANALRRVMIAEVPTVAIDLVEIEVNS
SVLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRVKCMTDQTLD
VTSKDLYSSDPTVSPVDFSDPSATDSPDNNRGIIIVKLRRGQELKLRAIARKGIGKDHAK
WSPAATVTFMYEPEIHINEDLMETLTLEEKREWVDSSPTRVFEIDPVTQQVMVVDAEAYT
YDDEVLKKAEAMGKPGLVEIIARQDSFIFTVESTGAVKASQLVLNAIEILKQKLDAVRLS
EDTVEADDQFGELGAHMRGG
NT seq 963 nt   +upstreamnt  +downstreamnt
atggagggaggagtctcctacgcgcgcatgcctcgtgtcaaaatccgcgagctgaaggac
gactacgccaagttcgagctccgcgacaccgacgcgagtatagccaacgcgctgcggcgc
gtgatgatcgcggaggtgccgacggtcgccatcgacctcgtggagatcgaggtcaactcg
tcggtgctcaacgacgagttcatcgcgcacaggctcggcctcattcccctcacgagcgag
cgcgccatgtccatgcgcttctcacgtgactgcgatgcctgcgacggtgacggacagtgc
gagttttgctccgtcgagtttcatcttagggtaaagtgcatgaccgatcagaccctcgat
gttacgagcaaggatctctacagttctgaccctactgtgagtcccgttgatttctctgac
ccctctgccactgactccccagacaacaacagagggattatcattgtgaagttgagacgc
ggacaagagctgaagctgagagcgattgctaggaaggggattgggaaggatcatgctaaa
tggtcacctgctgcaactgtcactttcatgtatgaaccagagattcatataaatgaggat
ttgatggagaccttgactctggaagagaaaagggaatgggttgacagtagtccaacccgt
gtctttgaaattgatccagtgacacaacaggtcatggtggttgatgctgaggcatacaca
tatgatgacgaggtgcttaagaaagcagaagctatgggcaagcctgggcttgtagaaatc
attgcgaggcaggatagcttcatattcactgttgagtctaccggagcagttaaagcttct
caattggttctaaatgccatagaaattctcaagcagaagttggatgctgtgcggctatct
gaagatacagtggaggccgatgatcagtttggtgagctaggtgcacatatgcgaggaggt
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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