KEGG   Glycine soja (wild soybean): 114407115
Entry
114407115         CDS       T06057                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like isoform X1
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114407115
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gsj01009]
    114407115
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114407115
   03036 Chromosome and associated proteins [BR:gsj03036]
    114407115
Protein phosphatases and associated proteins [BR:gsj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     114407115
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     114407115
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     114407115
SSDB
Motif
Pfam: B56
Other DBs
NCBI-GeneID: 114407115
NCBI-ProteinID: XP_028225891
Position
3:41538915..41545454
AA seq 470 aa
MFKRIMKGGQKKPSKTDPSDPSPLAPAAAGAAAAPALVVPPPSGTIEPLPLFRDVAVSER
QNLFIRKLQICCHVLDFSDTLKSVREKEIKRQTLMELVDFIQSGSGKITETCQEEMIKMV
SANVFRCLPPASHENTGQEATDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKR
YIDHSFVLKLLDLFDSEDPREREYLKTILHRVYGKFMVHRPFIRKGINNIFFRFIYETER
HSGIGELLEILGSIINGFALPMKEEHKLFLARALLPLHKPKPVGVYHQQLSYCIAQFVEK
DYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQTAEFQRCMVPLFRQVARCLNS
SHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEALEKNIKSHWNQAVHGLTVNVRKMF
IEMDAELFEECQRQYEEREAKAKELEEQRELNWKRLADAAAQNGVDMVTA
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgttcaagcgaatcatgaagggagggcagaagaagccctccaagacggacccgagcgat
ccgtcgcccttggctccggcggcggcgggtgcggcagccgctccggcgctggtggttcct
ccgccgtcgggcaccatagagcctctgcctctcttccgcgacgtggcggtctcggagcgg
cagaacctcttcatccggaagctccagatatgctgccacgtgttggacttctccgacacg
ctgaaatccgttcgggagaaggaaatcaagagacagactctaatggagctcgtggatttc
atccaatccgggtcggggaagataacggagacttgccaggaagagatgatcaaaatggtg
tcggcgaacgttttccggtgcctcccgccggcttcgcacgagaacaccggccaggaagcc
accgatccggaagaggaggagccgtgcctcgaaccagcgtggccgcacttacaactcgtc
tacgagcttctcctcagatacgtggtttcctccgacactgacacaaaggtcgcaaaacga
tatattgatcattcttttgttctcaaactccttgatttgtttgactccgaggaccctcgt
gagcgcgagtatttgaaaaccatattgcaccgtgtgtatgggaaattcatggttcatcgt
cccttcattaggaagggcattaacaacatattttttcggtttatatatgagactgagcgg
catagtggtattggggagcttcttgagattctggggagtattattaatgggtttgctttg
cccatgaaggaggagcataagttgtttcttgctagggcgcttctgcctctgcataagccc
aagccggttggggtgtaccaccagcagttgtcgtattgcattgcgcagtttgtggagaag
gattacaaactcgcggacacggttattaggggtttgttgaagtattggccagtcactaat
tgccagaaggaggtgctcttccttggggaactagaggaggtgctggaggccacgcagacc
gcggagttccaacgctgcatggtccctctttttagacaggttgcccgctgcctcaatagt
tctcactttcaggttgcagaacgagctctctttttgtggaataatgagcatattgtcagc
ttaattgcccaaaacaggactgtagtattacccataatatttgaagcattggagaaaaat
atcaagagtcattggaaccaggctgttcacggcctgactgtgaacgttcggaaaatgttc
atagaaatggatgccgaattgtttgaagagtgtcagaggcagtatgaagagagggaggct
aaagcaaaagaattagaagagcagcgggaattgaattggaaaagactggcagatgcagct
gcacagaatggggtggatatggtcacagcttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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