KEGG   Glycine soja (wild soybean): 114408382Help
Entry
114408382         CDS       T06057                                 

Definition
(RefSeq) DEAD-box ATP-dependent RNA helicase 50-like
  KO
K13179  ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsj03041]
    114408382
   03009 Ribosome biogenesis [BR:gsj03009]
    114408382
Enzymes [BR:gsj01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     114408382
Spliceosome [BR:gsj03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    114408382
Ribosome biogenesis [BR:gsj03009]
 Eukaryotic type
  90S particles
   Helicases
    114408382
  Pre-60S particles
    114408382
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DEAD Helicase_C ResIII SNF2_N CMS1 Helicase_C_2
Motif
Other DBs
NCBI-GeneID: 114408382
NCBI-ProteinID: XP_028227217
Position
4
AA seq 528 aa AA seqDB search
MAVGQLVPSNLFLNHSAATTLIPTSTPPRHRHLLCISSANHTTATDNDSPFSSFGRVKTL
LVHRRRKDQSHRRAVQLEDDNDDDIAPRPRRSQSRSRGGERWDMIPNYTPQSKSATDTKF
FSLKSFKEIGCSEYMIESLQKLLLSRPSHVQAMAFAPVISGKTCVIADQSGSGKTLAYLA
PIIQLLRLEELEGRSSKSSSQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGG
FRQKTQLENLQQGVDVLIATPGRFLFLIHEGFLQLTNLRCAILDEVDILFGDEDFEVALQ
SLINSSPVDTQYLFVTATLPKNVYTKLVEVFPDCEMIMGPGMHRISSRLQEIIVDCSGED
GQEKTPDTAFLNKKTALLQLVEENPVPRTIVFCNKIETCRKVENLLKRFDRKGNHVQVLP
FHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFTRVDHVILFDFPRDPSEYV
RRVGRTARGAKGVGKAFIFVVGKQVSLARKIMERNQKGHPLHDVPSAY
NT seq 1587 nt NT seq  +upstreamnt  +downstreamnt
atggcggttgggcaacttgttccttcgaatttgttcctcaatcattctgctgctacaaca
ctcatacccacttccactccccccagacacagacaccttctctgtatttcttctgccaat
cacacaaccgcaaccgataacgattctccattctcaagtttcggaagagtgaagactctc
ctggtccacagaagaagaaaggaccaaagccatagacgcgccgttcaacttgaagatgat
aatgatgatgatatagcccctagacccagacgttctcagtctcggtcacgaggaggagaa
agatgggatatgattcccaattatactccacaaagcaaatcagcgactgacacaaagttt
ttcagtctaaagtccttcaaagaaataggttgcagtgaatatatgattgaatccctccag
aaactcttgttgagccggccttcccatgtacaggccatggcttttgcacctgttattagt
ggaaagacttgtgtcatagctgaccaaagtggttctggtaagacattagcttatctcgca
ccaatcatccagctccttagactagaagagcttgaaggacgtagtagtaaatcctcttca
caagctcctagagtccttgtcctcgcacccacggctgagttggcttctcaggtcttagat
aattgccgctccttgtctaaatctggagttccattcaagtctatggttgtcaccggaggt
tttcgccaaaaaactcaattggaaaatttacagcagggagttgatgtcttaatagctaca
cctggccgtttcttgttcctcatccatgaaggcttcttgcagttaacaaatctaagatgt
gctatcttggatgaggtagatatactctttggtgatgaggacttcgaagtggctcttcaa
tccttgatcaattcttcacctgtagacacacagtatttatttgtgactgcaactttacca
aaaaatgtttacaccaaattggttgaagtttttcctgattgtgaaatgattatggggcct
ggtatgcaccgaataagttctcgccttcaagagattatagtagattgcagtggagaagat
ggacaagaaaaaactcctgatacagcatttctgaacaagaaaactgcacttctgcagctt
gtggaggaaaatcctgtcccaagaactattgtgttctgcaacaaaattgaaacatgcaga
aaagttgaaaatttgttaaagcgttttgatagaaaaggaaatcacgtgcaagttctacca
ttccatgctgccatgacacaagaatcacggcttgctagtatggaagagtttacacgttct
ccatcaaaaggagtctcccagtttatggtttgcaccgacagagcatcacggggaatagac
ttcacaagagtggatcatgtcatactctttgacttcccacgtgatcccagtgaatatgta
cggcgtgttggaagaacagccagaggtgccaagggagtaggcaaggcatttatctttgtg
gttggcaagcaagtatcccttgcacgcaaaataatggaaagaaatcagaagggtcaccca
ctacatgatgtgccttcggcttattag

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