KEGG   Glycine soja (wild soybean): 114417954
Entry
114417954         CDS       T06057                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    114417954
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gsj01009]
    114417954
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsj03019]
    114417954
   03036 Chromosome and associated proteins [BR:gsj03036]
    114417954
Protein phosphatases and associated proteins [BR:gsj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     114417954
Messenger RNA biogenesis [BR:gsj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     114417954
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     114417954
SSDB
Motif
Pfam: WD40 ComGF Me-amine-dh_H
Other DBs
NCBI-GeneID: 114417954
NCBI-ProteinID: XP_028238847
Position
7:923545..936940
AA seq 515 aa
MNGGDEVVAAPAGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGG
RVVLFERTDTKDHHGSRRDLERMDYSISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IKWCQTANGALFLLSTNDKTIKFWKVQEKKVKKVSDMNVDPKAMGNGSIASSSNSSSSKS
YLANGVSPDGPYNYLNNDFSFPPEGVPSLRLPLVVTSHETSLVARCRRVYAHAHDYHINS
ISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTL
AYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILS
RDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVSTGSY
SNLFRVFGCVPGSTEAMTLEASKNPMRRQVPTPSRPSRSLGNSITRVVRRGAESASVDAN
GNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgaacggtggtgatgaggtcgtggcagctccggcgggtccaccgcagccgctggagtgg
aaattctcgcaggttttcggggaacgtacggcgggggaggaagttcaggaagtggatata
atttctgctattgaatttgacaagtctggtgatcatcttgctactggtgatcgtggtggt
cgagtagttctctttgagcggacagatacaaaagatcatcacggatcaagaagggacttg
gagaggatggactattctattagtagacatcctgagttccgttataaaacagagtttcag
agtcatgagcctgagtttgactatcttaagagtctggaaatagaagagaaaattaacaaa
atcaaatggtgccaaacagctaatggtgctttgttccttctatccacaaatgataaaacc
atcaaattttggaaggttcaagaaaagaaggtcaagaaagtttctgacatgaatgttgat
cctaaagcaatgggaaatggctctattgctagttcaagtaattccagtagctccaaatca
tatcttgcaaatggagtatctccagatggaccttacaattatttaaacaacgatttctca
tttccaccagaaggcgtaccttctctaagattaccattggtagtaaccagccatgagacc
agtttggtggctcgatgtcgtagagtatatgcccatgctcatgattatcatattaattct
atttcaaataacagcgatggagaaactttcatatcagctgatgatttacgaataaatctt
tggaacctggaaattagcaatcaaagttttaatattgttgatgtaaagcctgcaaatatg
gaggatctgactgaggttataacatcagcagaatttcaccctacacattgtaatacattg
gcatatagcagctcaaagggttcaattcgtcttgttgacttgcggcagtcagcattatgt
gattctcatgccaaactatttgaggaacaagaagcccctgggtcacgatcatttttcaca
gagattattgcctcaatctcagacataaaatttgggaaggatggaagatatatacttagt
cgtgattacatgaccttaaagttatgggacatcaatatggattctggtccagttgcaaca
ttccaggttcacgagtatttaaggccaaagctttgtgatttatatgaaaatgattcaatt
tttgataagtttgagtgttgtctaagtggtgatggattgcgtgtttcaactggttcttac
agcaatctattccgtgtgtttggttgtgttcctggaagtactgaggctatgactttggaa
gccagtaaaaatccaatgaggcgtcaagttccaaccccttcaaggccatctagatcactg
ggaaacagtataacaagagttgtaagacgtggagcagaaagtgccagtgtcgacgcaaat
gggaattcttttgatttcacaacaaagttgctgcacttagcatggcacccaactgagaat
tcaattgcttgtgctgctgcaaatagcttatacatgtactatgcttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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