KEGG   Glycine soja (wild soybean): 114419287Help
Entry
114419287         CDS       T06057                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
gsj  Glycine soja (wild soybean)
Pathway
gsj03040  Spliceosome
gsj04141  Protein processing in endoplasmic reticulum
gsj04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114419287
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    114419287
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114419287
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gsj01009]
    114419287
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsj03041]
    114419287
   03009 Ribosome biogenesis [BR:gsj03009]
    114419287
   03110 Chaperones and folding catalysts [BR:gsj03110]
    114419287
   04131 Membrane trafficking [BR:gsj04131]
    114419287
   03051 Proteasome [BR:gsj03051]
    114419287
   03029 Mitochondrial biogenesis [BR:gsj03029]
    114419287
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gsj04147]
    114419287
Protein phosphatases and associated proteins [BR:gsj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     114419287
Spliceosome [BR:gsj03041]
 Complex B
  Other components
   Prp19 complex
    114419287
 Complex C
   Prp19-CDC5 complex
    114419287
Ribosome biogenesis [BR:gsj03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    114419287
Chaperones and folding catalysts [BR:gsj03110]
 Heat shock proteins
  HSP70 / DNAK
   114419287
Membrane trafficking [BR:gsj04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    114419287
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    114419287
Proteasome [BR:gsj03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    114419287
Mitochondrial biogenesis [BR:gsj03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    114419287
Exosome [BR:gsj04147]
 Exosomal proteins
  Proteins found in most exosomes
   114419287
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl FGGY_C DUF357
Motif
Other DBs
NCBI-GeneID: 114419287
NCBI-ProteinID: XP_028240733
Position
7
AA seq 620 aa AA seqDB search
MAREYEGCAVGIDLGTTYSCVAVWLEQHCRVEIIHNDQGNNTTPSCVAFTDHQRLIGEAA
KNQAATNPENTVFDAKRLIGRKFSDPVIQKDKMLWPFKIVAGINDKPMISLNYKGQEKHL
LAEEVSSMVLTKMREIAEAYLETPVKNAVVTVPAYFNDSQRKATIDAGSIAGLNVMRIIN
EPTAAAIAYGLDKRTNCVGERSIFIFDLGGGTFDVSLLIIKDKVFRVKATAGNTHLGGED
FDNRMVNYFVQEFKRKNKVDISGNARALRRLRSACERAKRILSYAVTTNIEVDALFQGID
FCSSITRAKFEEINMELFEECMETVDRCLSDANMDKSSVHDVVLVGGSSRIPKVQELLQD
FFNGKILCKSINPDEAVAYGAAVQAALLSKGIVNVPDLVLLDITPLSLGISLKGDLMSVV
IPRNTTIPVKTTETYSTAVDNQSAVLIEVYEGERTRASDNNLLGFFRLSGIPPVPRNHLV
YICFAIDENGILSVSAEEKSTGNKNEITITNDKERLSTKEIKRMIQEAEYYQAEDKKFLR
KAKAMNDLDCYVYKIKNALKQKDISSKLCSKEKEDVSSAITRATDLLEGNNQQDDIAVFE
DNLKELESIIERMKAMGKIV
NT seq 1863 nt NT seq  +upstreamnt  +downstreamnt
atggccagagaatacgagggatgtgcagtgggaattgaccttggcacaacttactcgtgt
gttgcagtgtggctggagcagcactgtcgagtggagatcatccacaatgaccaaggcaac
aataccaccccttcttgtgttgctttcacagaccatcaaaggttgattggtgaagctgct
aaaaaccaggctgctaccaacccagagaacactgtgtttgatgctaagaggttgattggt
aggaaatttagtgaccctgttattcaaaaagataaaatgttgtggccgttcaagattgtt
gctggtattaatgacaaacccatgatttcccttaattacaagggccaggagaaacacctt
ttagccgaggaagtatcatctatggtcctcacaaagatgcgggagattgcagaggcatat
ttggaaacacctgtaaaaaatgcagtggttactgtgcctgcttatttcaatgactcacaa
cgtaaagccaccatagatgctggttctattgcaggcctgaatgttatgcggataatcaat
gaacctactgctgcagctattgcatatgggcttgacaagagaactaattgtgttggagag
cgaagcatcttcatctttgaccttggtggtggtacttttgacgtgtctctcctcataatt
aaggataaggtcttccgagttaaggccactgcaggaaacactcaccttggaggggaggac
tttgacaacagaatggtgaactactttgtacaagagttcaagaggaagaacaaagttgac
attagtgggaatgcaagagccctaaggaggttgagaagtgcatgcgagagggcaaaaagg
atactctcgtatgcagtgactaccaacattgaggtagatgctttattccagggcattgac
ttttgctcctcaatcacccgtgcaaaatttgaggaaatcaatatggagctctttgaagag
tgtatggaaacagtagataggtgtctttctgatgccaacatggacaagagcagtgtacat
gatgttgtccttgttggtggttcttctaggattccaaaagtgcaggagctattgcaggac
ttcttcaatgggaagattctgtgcaagagcatcaaccctgacgaggctgttgcttatggt
gcagctgtgcaggctgctttgttgagtaaaggcattgtgaatgttccagacttggtcctg
ttggatattacacctctgtctcttggtatatcgctaaaaggagatctcatgagtgtggtg
attcctagaaatactaccattcctgtaaagacgacagaaacatactctacagctgtagat
aaccaatctgctgtcctgattgaggtttatgagggtgagagaacaagagccagtgataac
aatttgctgggtttttttaggctttctggcattcctcctgttcctcgtaaccatcttgtg
tatatttgctttgccatagatgaaaatggtattctatctgtttctgccgaggaaaaaagc
actggcaataagaatgagattaccataaccaatgacaaagaaaggttatcaaccaaagaa
attaaaagaatgattcaagaagctgagtattaccaggctgaagataagaaattccttagg
aaggccaaagcaatgaatgatttggattgttacgtttacaagatcaagaatgctttaaag
caaaaggatatcagctcaaagctttgctcaaaagaaaaggaggatgttagttctgcaatt
acaagagctacagatttgcttgaaggtaataaccagcaggatgacatagctgtgtttgag
gataatctgaaagagcttgagagcatcattgaacgcatgaaggccatgggcaaaattgtt
tag

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