KEGG   Glycine soja (wild soybean): 114419295
Entry
114419295         CDS       T06057                                 
Name
(RefSeq) probable RNA-dependent RNA polymerase 1
  KO
K11699  RNA-dependent RNA polymerase [EC:2.7.7.48]
Organism
gsj  Glycine soja (wild soybean)
Brite
KEGG Orthology (KO) [BR:gsj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gsj03036]
    114419295
Enzymes [BR:gsj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.48  RNA-directed RNA polymerase
     114419295
Chromosome and associated proteins [BR:gsj03036]
 Eukaryotic type
  Gene silencing
   RNA interference (RNAi) pathway
    RDRC (RNA-directed RNA polymerase complex)
     114419295
SSDB
Motif
Pfam: RdRP RNA_replicase_B
Other DBs
NCBI-GeneID: 114419295
NCBI-ProteinID: XP_028240744
Position
7:31752943..31760702
AA seq 1135 aa
MSKTIQMHGFQSNVSAEEVKKFLEKHTGHQTVHAVEVWQHKGDPTTHVDVQFTDRKSVET
ILLLVTQHLSYSDYVLNATEINHDIFPKPRNFPHRMDDIVVHFGCQTSKDKLSVLWEHPN
VSVKFGSRLRKMYIFFNYLTMDYKLQISSESISRIELRHSDDLTKKFLLFQLRGAPMIYE
KDVSKSKYFKEACDNHWFRGVDFTPSSSIGQSSTLCFELPQSIEVPKFNQHYRNYSEVDD
SIFTLEKHLGFSSNFKFVPIVIPPEGFNLPYKILFKINSLIQHGCLPVLAIDINLFHLVD
PRRVRLEYIESALHKLDQMKECCYEPAQWLEKQYNKYSTNSLVPLSSAISLDDGLVYVHR
VQVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFVDEDMDKLHSADLVPRSSSTDVD
RETKLHERVLSTLKNGIAIGDKKFEFLAFSPSQLRDNSVWMFASRTGLTASDIRKWMGEF
HEIRNVAKYAARLGQSFSSSRETVSVGEHEIEIIPDIELRRGETKYCFTDGIGKISSELA
QEVAKKCGCRDNNIPSAFQIRYGGYKGVVAIDPTSSTKLSLRKSMFKYKSENTKLDVLAW
SKYKPCYLNRQIITLLSTLGVKDRVFRKKQREILNQLKMISTKPLMVLDLMFTGEITNIL
REMLICGFHQTKEPFLSMMLQTLCASKLQELQLKTRILVKKGRALLGCLDETRTLKYGEV
FVQIAHQRNKQIHAMPSLSSNRYGGNKSKHIVKGKVVVAKNPCLHPGDVRILRAVDVPSL
HHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPHQENPMDHAPSQVMNVDH
DVTLQEVQEYFAHYIVEDRLGIVASAHTVFADKDPEKAMSPACTELAKLHSIAVDFAKSG
VPAEIPQHLRVEEYPDFMEKPDKPSYQSNSIIGKLYREVRNVAQHKNLNKTFTRRVARQS
YDPDMEIDGFEKYTATACEYKNMYDFKLGNLMDYYGIETEAEIISGNILKMSKSFNERKD
LEGINHAVMSLRKETRSWFNVMVNKSNSQGRDAYAIASAWYLVTYHPRYWGSYNQGLNRG
HFLSFPWCVHDTLIQIKKDKVRQRTFTVELCTILKLFPILLFCFLLWMIVQYLTD
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgtccaagacaattcaaatgcatggattccaatctaatgtgtcagctgaagaggtgaag
aaatttttggagaaacatacaggccaccaaactgttcatgctgtagaggtttggcagcat
aaaggagatcctacaacacatgttgatgttcaattcacagacagaaaaagtgttgaaaca
atcttgctcttagttactcagcacctatcttacagtgactatgttctaaatgctactgaa
ataaatcatgacatttttccaaagccaaggaactttcctcacagaatggatgatatagta
gtgcactttggatgtcaaacatccaaggacaaacttagtgtactctgggaacatccaaat
gtttcagttaaattcgggtcaagattgagaaagatgtatatatttttcaattatttgaca
atggattataagctgcagatttcttctgagagtatatcgcgtattgagctgcgccattca
gatgatttaaccaagaagtttctcctttttcagttacgcggtgctcctatgatctatgag
aaagatgtttccaaaagcaaatattttaaggaggcttgtgacaaccattggtttcgaggg
gtagatttcaccccatcaagtagcattggacaatcttccactctatgttttgagcttcca
caaagtattgaggttccaaaattcaatcagcattatcgtaattatagtgaagttgatgac
agcatctttactcttgagaaacaccttggtttctcttctaacttcaaatttgtccccata
gtgatccctccagaaggcttcaacttgccatacaaaatattgttcaaaatcaactcatta
attcagcatggatgtcttcctgtgctagcaattgacatcaatcttttccatctagttgat
cctagaagagtaaggcttgaatacatagaaagtgccctgcataaattagatcaaatgaaa
gaatgctgctatgaacctgcacaatggttggagaaacagtataacaaatactcaacaaat
agtctagttccactatctagtgctatttctttagatgatgggttggtctatgtgcataga
gtacaagtaactccatccaagatatatttctgtggtcctgaagtgaacctttccaatcgt
gtcttgcgcaactatcctgaagacactgataacttccttcgtgtttcttttgttgatgag
gacatggataaacttcattcagctgatctagtgccacgttcatcgtctacagatgtggac
agagaaacaaagcttcacgagagggtactgtctacactaaaaaatggcattgcaattggt
gataagaagtttgagtttcttgccttctcaccgagtcaattgcgggataactctgtctgg
atgtttgcatcaagaactggacttactgcatctgatataagaaagtggatgggagagttt
catgaaattagaaatgtggccaaatatgcagcaaggctgggtcaatcattcagctcttcc
agggaaacagtaagtgttggcgaacatgaaattgaaattattcctgatatagaattaaga
agaggtgaaaccaaatactgtttcacagatggcattgggaagatatcttctgaattggct
caagaagtggctaagaaatgtggttgtagggataataatattccatcagcatttcaaatc
agatatggggggtacaaaggtgttgttgctattgatcctacttcatcaactaaactgtcc
ttaagaaagagcatgttcaagtacaagtcagaaaacacaaaattggatgttttggcatgg
agcaaatacaaaccttgttaccttaatcgacaaataatcaccctcttgtccacactcggg
gtcaaggatcgagtcttcagaaagaaacaaagagagattcttaatcaactaaaaatgata
tcaacaaagccactgatggtattagatttgatgttcacaggagagattacaaatatttta
agggaaatgctcatttgtggctttcatcaaactaaggaaccatttctttccatgatgttg
caaacattgtgtgcatcaaaattacaggaattgcagctcaaaactaggatacttgttaag
aaaggaagagcactcttaggatgcttagatgaaactaggacattaaaatatggagaggta
tttgtgcagatagctcaccaaagaaataaacaaattcatgctatgccctctctttcttct
aacagatatggaggaaacaagagcaagcatattgttaaaggaaaggtagttgtagcaaaa
aatccctgtctgcacccaggagatgtgcgcattttaagagcagtggatgtaccttccttg
catcatatggtggactgtgttgtttttccacagaaggggagaagaccacatcctaatgaa
tgttcaggaagtgacttagatggagatatctactttgtcagttgggaccctgatcttatt
cctcctcatcaggaaaatcccatggatcatgcaccatctcaagttatgaatgtggatcat
gatgttacattacaggaagttcaggagtattttgctcactacatagttgaagacaggcta
ggaattgttgcaagtgcacacactgtctttgctgataaagatccagaaaaggcaatgagc
cctgcatgtactgagcttgcaaagctacactcaattgcagttgattttgcaaaatctgga
gtgccagcagaaattccacaacatcttcgcgtggaagagtatccggacttcatggaaaag
ccagacaaaccaagttaccaatcaaatagcataatagggaagctttatcgcgaggtgagg
aatgttgcacaacacaagaatctcaataagaccttcactagaagagtggcgaggcaatca
tatgaccccgacatggagattgatggctttgagaagtacacggctactgcttgtgaatac
aagaacatgtatgatttcaagttggggaacctgatggattactatggcatagagacagaa
gcagaaataatcagtggcaacatcttgaaaatgtcaaaatccttcaatgaaagaaaggat
ttggaaggaattaatcatgctgtgatgtcactaagaaaggaaactagaagctggttcaat
gtgatggtaaacaagtcaaattctcaaggtcgtgatgcctacgcaatagcatcagcttgg
taccttgttacatatcatcctaggtattggggatcctacaatcaggggctgaacaggggt
catttcctcagtttcccatggtgtgtgcatgacactctcatccagataaagaaggacaaa
gtcagacagagaacttttacagtggagctttgcacaatactgaaactgtttcccatatta
ctgttttgcttcttattgtggatgatagtgcaatatctaaccgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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