KEGG   Galdieria sulphuraria: Gasu_04890
Entry
Gasu_04890        CDS       T02926                                 
Name
(RefSeq) vacuolar assembly protein Vps41
  KO
K20184  vacuolar protein sorting-associated protein 41
Organism
gsl  Galdieria sulphuraria
Pathway
gsl04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    Gasu_04890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gsl04131]
    Gasu_04890
Membrane trafficking [BR:gsl04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    Gasu_04890
SSDB
Motif
Pfam: Clathrin
Other DBs
NCBI-GeneID: 17090986
NCBI-ProteinID: XP_005708922
UniProt: M2XQA5
Position
Unknown
AA seq 881 aa
MSLETGEEEEPVFHTSYFLSNTVGIREEQLVNGNKTVVTAITAGTKVIACGTLTGSIYLV
DCSGSVLIKSLECKHSNAVRDLSLSEDNSVVVSVGKGDTTVCISFVFEERNSLQYNYSKS
RLFTGAELSSVAVDPFFGRVSSPQMQRFCFGTTDGELLLHTKSWLGGGSDAVLHHGEGPI
YCIKWQGDLIAWANNRGIRIFDVRFERGVCIVDPPTDWIPNELSWLASNTVSSTLGPREN
KAKKSSSIELPFASLEPRLTWRHLISDTYYSLYVCWYSCCKVISVSSTAEGKSGRRQVRV
LGNISKDELHVRNIVQVAPFGDKAVAMLCVGQPSDQKALFYADKTTVAPIADTFSMELVI
VSLSQNDLSKTRTERKVINNILFSEEPLQKNSLSPSRQGLVHIPGGEPILLAFSTCLPES
LLSGHIEDVYDENSENDASQARTGAVWNVLSLRPFSYIERIEWMLDRERYREAVEIAEMA
PANQLLECGFSIEKLGERFINHLLEKGDYDTLAIVLPRMIHGEDTEFESFTSGIEAHLTA
KRMEKESSEGLYTLESRKRRWEFWIKKLIQIGKLQFVVFAIPCRDPTLSSATYDEVLRYL
LQVNPILFTEVINTWPADVYNLGLISREVELAIERLKNTSTLGSNEEGVLSKLQEAMATL
YTSSGRHDKTLELIFEEGDIRCFDYIREHALYEAIRSRESLRRLFEISEQKASELLGNAP
ESLLPPEVVVPILQELGNRRWLFLYLDFIFSLDPSRAVIFHPMQVSLYAECAPEKLLQFL
KESSSYSLDNALEELSRFGENKFAKERVYILSRMGDLTTAMDIILFEMDQVNEAIQFCKE
HEDPSLWNRLLGFAENDGRILVALLYDPSVCYYTKFFCCKI
NT seq 2646 nt   +upstreamnt  +downstreamnt
atgtcgctcgagacaggagaagaagaggagccagtttttcatactagttattttctttcc
aacactgttggaatcagagaggaacaactggtaaatggaaataaaactgttgtaactgca
ataactgctggtaccaaagtaattgcctgcggtactttgaccggaagcatatatttggtt
gattgttcgggttctgttcttatcaaaagtttagaatgcaaacactcaaatgccgtgaga
gacctctctttgtcagaagacaactcagtggtagtgtcagttgggaaaggagacacaact
gtgtgtataagctttgtatttgaggagagaaatagtcttcaatataattactctaaatca
cgtcttttcacgggagcagaattgtcaagtgtagctgtggatcctttttttggaagagtt
agtagtcctcaaatgcagcgtttttgttttggaacgactgatggcgaattgttgctgcat
acaaaatcgtggttaggaggaggatcggatgccgtactgcatcatggggaaggacctatt
tattgtataaagtggcaaggtgaccttattgcttgggcaaataatcgaggaatacgaatt
ttcgatgttcgttttgaaagaggtgtgtgcattgtggatcctcctacagattggataccg
aatgaactctcttggttagcttccaatactgtttcatcaactttaggtccaagagagaac
aaggccaaaaaaagttcttcaatagagctaccttttgcatctttagaacctagactaact
tggcgtcatttgatatccgatacatattattctttatatgtatgttggtattcttgttgc
aaggttatttcagtatcttcgactgcggaaggaaaatcaggtcgacgtcaagttagagta
cttggaaatatttcaaaagatgaacttcatgtacgaaacattgttcaagttgccccattt
ggagataaggctgttgctatgttatgtgtgggtcaaccatcggatcaaaaagcactgttt
tatgctgacaagacaactgttgctccgattgcggacacattttcaatggagcttgtcatc
gtcagcctgtcacaaaacgatttgtcgaaaactagaacagaaagaaaagtgataaataat
attctcttttcggaagaacctctccagaaaaactctttatcaccatcgagacaaggtttg
gttcatattcctggtggtgaacctatactattagcgttcagtacttgcttaccagaatct
ttactatcaggtcatatagaagatgtttatgacgagaatagtgagaatgatgcctcacag
gcacggactggagctgtgtggaatgtccttagcttgcgtccattttcatatatagaaaga
atagaatggatgttggatagagaacgatatcgagaagctgttgaaattgcggagatggca
ccagctaaccaacttttggaatgtggtttcagtattgagaaacttggagaaagattcatc
aatcatctgttggaaaaaggtgactatgatacgttggcaattgtccttcctcgcatgatt
catggggaagataccgaatttgaaagcttcacgagcggcatcgaggcacacttaactgcc
aaaagaatggagaaagagtcttcagaaggtttgtatactttggaaagtcgaaaacgtcga
tgggagttttggattaagaaactgattcaaattggaaagctgcaatttgttgtatttgcc
attccctgccgggatccaacgttatcatcagcgacatatgatgaagttttgcgatattta
ctgcaggtgaatcccattctatttactgaagttataaacacctggccagcagatgtctat
aacttaggacttattagtcgtgaggttgaactagcgattgaaagattgaagaatacatcg
acattgggttccaatgaagaaggggttctttctaagttacaagaagctatggcgactctt
tatacgagtagtggaaggcatgacaaaacattggagttgatatttgaagagggagacatc
agatgctttgactatattcgagaacatgctctatatgaagccattcgtagtagagagtcc
ctccgaagactgtttgaaatttccgaacaaaaggccagtgaacttttaggaaatgctcca
gaatctctcctgcctcctgaagttgtggttcctatccttcaggaacttggcaatcgaaga
tggttatttctatatctcgatttcattttttcattagatccttcaagagctgtaatattt
catcccatgcaagtttctctttacgcagaatgtgctcctgagaagcttctgcaattttta
aaagaaagcagctcgtactcattagataatgcattggaagaactttcacggtttggtgaa
aacaagtttgccaaagaaagagtttatatattgagtagaatgggtgatctgaccactgct
atggatataattctttttgaaatggatcaagtgaacgaagcaattcagttttgtaaggaa
catgaagacccaagtttgtggaatagactcttaggatttgcagagaacgatggaagaata
ttagttgctctcctatacgatccctcggtatgttactataccaaatttttctgttgtaaa
atctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system