KEGG   Galdieria sulphuraria: Gasu_34230
Entry
Gasu_34230        CDS       T02926                                 
Name
(RefSeq) ATP-dependent RNA helicase
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Gasu_34230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gsl03041]
    Gasu_34230
Enzymes [BR:gsl01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     Gasu_34230
Spliceosome [BR:gsl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    Gasu_34230
 Complex C
   U5 SnRNP specific factors
    Gasu_34230
SSDB
Motif
Pfam: DEAD Helicase_C ResIII DUF2986
Other DBs
NCBI-GeneID: 17088039
NCBI-ProteinID: XP_005705743
UniProt: M2Y012
Position
Unknown
AA seq 763 aa
MFQSAKDEKSRRHISPKHSRRRERSVSSRRDSTVYSKRSRKHFRSELVEETTSRKTKADY
IETLDSPQSGGNLEHSSSSFPYKSQSLGKQVFSNDTQLKKTKREPISLEDIMKKKREEEE
EAQKPRFISKSERERQALEKLYERRKAVDPMKVESTQFHSNSLSKGIPRPPVDVQRERNQ
KQSDTSRENDEESHRLKELLRKHYMKEKDTKSRLTKPSERFRFRFEWDNSEDTLNTEEYA
ELSSFVEVPLLFGRGHRGGMDPASTPSKAPSKRVTRPKVSDMEGVPDSRLDMTLEDPVHH
RHKKDMRHWSEKPKEEMTERDWRIFREDHSIAYRGGKAPFPARNWEETGLPRVLLDSVRY
IAKYKQPTPIQMAAIPIGLAKRDMIGLAETGSGKTAAFVLPMLVYISQRPPMTAANAAQG
PYAVILAPTRELAQQIEEETRKFAEPLGYRVCSVVGGVSIEEQGMKLREGVEIVIATPGR
MIDCLERRYCVLNQCDYVVLDEADRMIDMGFEPQVQGVLDAMPSSHLKPEVEELSEEFME
ESSSILYRQTFMFSATMPPAVERLARKFLRNPIIVAVGDIGKGAELVQQRVEYVPNETKK
KLRFFEVVGYADPPILVFLNTKRGCDTLVRAIETESGLDIRATVIHSGKPQELREEHLEG
FKQGKYDILIATDVLGRGIDIKGVNLVINYEMPNKIENYTHRIGRTGRAGREGLAISFVT
PADSEIFYDLKLQLEKVGAKVPPEIANHESVKSKSQGFGIIRD
NT seq 2292 nt   +upstreamnt  +downstreamnt
atgtttcaatccgcaaaggacgagaaaagtcgtcgtcatatatcaccgaaacatagtaga
agaagagagcgttctgtttcttcccgaagagactctacagtttattcgaaacgcagcaga
aaacattttcgttccgaacttgttgaagagactacttctcggaagacaaaggcagactat
attgaaacccttgatagtccacaaagcggtggcaatttagaacattcttcttcttcgttt
ccctataaaagtcaatctttggggaaacaagttttttctaatgacacacagctgaaaaag
acgaagcgggaacccatctctttggaggatattatgaagaagaagagagaagaagaagaa
gaagcacaaaagcctcgttttatctctaaaagtgaacgagaaagacaagccttggaaaaa
ctttatgaaaggaggaaggcagtagatcctatgaaggtggaaagtacacaatttcatagc
aactctttatcaaagggcatcccgagacctcctgtagatgtacaaagagaaagaaatcag
aaacagagtgacactagtcgggagaatgatgaagagtcacatcgtcttaaggaacttctt
agaaaacactatatgaaagagaaggatacaaagtcacgactaacaaagcctagcgaaaga
ttccgttttcgtttcgaatgggacaactcggaagatactttgaacactgaagagtacgct
gagctttcctcctttgttgaagttccactcctttttgggagaggacatcgtggaggaatg
gatcctgcctccacgccctcaaaggctccttcgaaacgtgtcactagaccgaaagtttct
gatatggagggagtaccggatagtagactggatatgactcttgaagatcctgttcaccat
cgacacaaaaaagacatgagacactggtcggaaaaaccaaaagaagaaatgacggagcgt
gactggagaatctttcgcgaggatcatagcatagcttatcgtggtggaaaagctcctttt
ccagctcgaaattgggaggagactggtttacctcgcgttcttttggattctgttcgatat
attgcaaagtacaagcaaccgacacccatacaaatggctgctattccaataggcttagca
aagcgtgacatgataggacttgctgaaacaggaagtggcaaaactgcagcttttgttctt
cctatgttggtttatataagtcaacgtcctcctatgacagctgcaaacgctgcacagggt
ccatatgcagtcatattggcacctacaagagaacttgcgcaacaaattgaggaagaaaca
cggaagtttgcagaacctctaggttatcgagtctgttcggttgttggaggagtttccata
gaggaacagggaatgaagcttagagaaggcgttgaaatagtcatagctactcccggaaga
atgattgattgccttgaacgaagatattgcgttctcaaccagtgtgactatgtcgtgttg
gatgaagctgatagaatgattgatatgggttttgagcctcaggtacaaggagttttggat
gctatgccttcttctcatttgaaaccggaagttgaggaattaagtgaagagtttatggaa
gagtcttcaagtattctatatcggcaaacctttatgttttcagcaaccatgccacctgct
gtagaaagattggcaagaaaattcttgcgcaatcctatcatagttgcagtcggagatatt
ggaaaaggagcagaattggtgcagcaaagagtcgaatatgttcccaatgaaacgaagaaa
aagctacgtttctttgaagttgttggatatgcggatccacctattttagtatttctcaac
acgaagagaggttgtgacacactggttcgtgcaatagaaactgaaagtggtttagacatt
cgagccacggttatacactctggcaagcctcaagagttgagagaagaacacttggaaggt
ttcaaacagggtaaatatgatatattgattgccactgatgtcctaggaagaggaatagat
atcaaaggggtcaatcttgtaatcaactatgaaatgccaaacaagatagagaattatacg
catcgaataggtagaactggaagagctggaagagaaggattggctatttcctttgtgaca
cccgcagattcagaaattttttatgacttgaaacttcaactagaaaaagttggagcaaaa
gttccaccagaaatagccaaccatgagtctgtcaaaagcaaaagtcaaggattcggaatt
atccgcgattaa

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