KEGG   Galdieria sulphuraria: Gasu_40940
Entry
Gasu_40940        CDS       T02926                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit C
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03020  RNA polymerase
gsl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Gasu_40940
  09124 Replication and repair
   03420 Nucleotide excision repair
    Gasu_40940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsl03021]
    Gasu_40940
   03400 DNA repair and recombination proteins [BR:gsl03400]
    Gasu_40940
Transcription machinery [BR:gsl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     Gasu_40940
DNA repair and recombination proteins [BR:gsl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Gasu_40940
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L
Other DBs
NCBI-GeneID: 17087237
NCBI-ProteinID: XP_005704918
UniProt: M2XXQ9
Position
Unknown
AA seq 257 aa
MPFAKTPTIHINRQTFNEMDFIITDTDTSVANAIRRVAIAQVPTMAIDLIHMQVNTSSLH
DELLAHRLGLIPLTSHRVDEFEYTRDCPYCSDHCLHCSVTFELDVQCTEEAMTVTSQDLV
NKSAHESQLAASVQPVHFSGEYNPTLSEENGLNGIVLAKLAKGQRIQLTAIAKKGVGKEH
AKWSPVCTISYQTDPSVQFNLNKLNTLLSEEAKRALVKSSDECLAIDPKSNQLIYETAFT
LGRISLPLDCVKKMTLT
NT seq 774 nt   +upstreamnt  +downstreamnt
atgccttttgctaaaacacctacgattcatatcaaccgacaaactttcaacgaaatggac
tttatcataacagatacagatacttctgtagcaaacgctataagaagagtagctattgca
caagttcctactatggctatagacttgatacatatgcaagtcaatacttcttccttacac
gatgagttgttagcccatcgactgggtttgatacctttaacaagtcatagagtggatgag
tttgaatatactcgagattgtccttattgtagtgaccactgtttacactgttcggttact
tttgaattggacgtacaatgtacagaagaagctatgacagtgacttctcaagacttggtg
aataagagtgcccatgagagtcaacttgctgctagtgttcaacctgttcacttttcaggt
gaatacaatccaactctatcggaagaaaatggattgaatggtattgttttggcaaagttg
gcaaaaggacaacgaattcaattgacagccatagctaagaaaggagtgggtaaggaacat
gccaaatggtctcctgtttgtactatttcttatcaaacagacccatcagtgcagttcaat
ttgaataagctgaatactttgctttctgaggaagccaaaagagcgttggtgaaatcaagt
gacgagtgtttggccatcgatcccaaaagcaatcaactgatatatgagacagcttttact
ttgggaagaatttctttacctttggattgtgtaaagaagatgactcttacttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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