KEGG   Gynuella sunshinyii: YC6258_03786
Entry
YC6258_03786      CDS       T03690                                 
Name
(GenBank) nuclease subunit of the excinuclease complex
  KO
K03703  excinuclease ABC subunit C
Organism
gsn  Gynuella sunshinyii
Pathway
gsn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    YC6258_03786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsn03400]
    YC6258_03786
DNA repair and recombination proteins [BR:gsn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     YC6258_03786
SSDB
Motif
Pfam: UvrC_RNaseH_dom HHH_5 UVR GIY-YIG HHH_2 HHH HHH_3
Other DBs
NCBI-ProteinID: AJQ95822
UniProt: A0A0C5VM89
Position
complement(4099782..4101536)
AA seq 584 aa
MLGEDNELLYVGKAKNLKARVGSYFHSRGLTNKTVALVSHICHINVTITHSETEALLLEQ
TLIKTHKPPYNIMLVDDKGYPYLLLSDQTFPGIHFHRGSKRKKGTYFGPYPGASAVREAL
SVLQKAFKVRQCEDSVFSNRTRPCLQYQIKRCKAPCVGLVSEDEYKEDVLHTRLFLEGKS
NDLIQQLEIEMDRAASDLNFEKAAEIRDQLLFVRKIQEQQFVAGQAGNVDVLAMELQASG
CCIAMIIIRDGRVLGSRQFFPRIGLEEEAETAFEAFIGQYYFGQRNHEIPNEIMTNLELA
NYDLFSAAFEQEFNRKVKFSHNVRGDRRKWLNLAVTNATEQLALHIANRKSILGRFTELE
KQLQWETDIERIECFDISHSQGEATVASCVVFGREGPLKSDYRRFNITGITGGDDYAAME
QALTRRYKRLMVEEHKLPTILMVDGGKGQLNVARRVMDELQMNQTLLMGIAKGEGRKPGL
ETLYLQDAEHTLELEKHSPAFHLLQHIRDEAHRFAITGHRGKRGKARTGSLLDDIPGIGA
ERRKALIRYFGSARGVMAASADEIAKVKGISKTIAQNIYEFLHN
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgctgggtgaagacaacgaattactctatgttggcaaagccaaaaatcttaaggccagg
gttggctcttattttcattcccgtgggctgaccaacaaaacggttgccctggtcagtcat
atttgtcatataaatgttacgatcactcatagtgagacagaggcgctactactcgaacag
actctgatcaaaacccacaaaccaccatataacatcatgctggtggatgataagggatat
ccatatctacttctgtccgatcaaacatttcctggcatacattttcatcgcgggtcgaag
cggaagaaaggaacgtacttcgggccatatcccggagcatctgcagtcagagaagcactc
tcggtattacagaaagcgttcaaagtacgccaatgcgaagactctgttttcagcaatcgc
acccgcccatgccttcaatatcagataaaacggtgtaaagcgccctgtgttggattggta
tctgaagacgaatataaagaagatgtgctccataccaggctttttcttgaaggcaaaagc
aatgacctgattcagcagctcgaaatcgaaatggatcgtgctgcttctgacttaaacttt
gaaaaagcagctgaaattcgtgaccagttgctgtttgtccgaaagattcaggagcaacaa
tttgttgcaggtcaggccggtaatgtggatgttcttgctatggagttgcaggcgtccggg
tgctgtatcgcgatgatcatcatccgtgatggtcgggtacttggcagccgccagtttttc
ccgcgcattggactggaagaggaagctgaaacagcgtttgaagcatttatcgggcagtac
tattttggtcagcgtaatcacgagattcccaatgaaatcatgaccaacctggagctagcc
aactacgacttgttcagtgctgcctttgagcaggaattcaaccgcaaggttaaattttcc
cataatgttcgtggggatcgccgcaaatggttgaatctcgcggtcaccaatgcgactgaa
caactggcgctccatattgctaaccgtaagagcatccttggccggtttaccgagcttgaa
aaacagctgcaatgggaaacagatatcgaacgtattgaatgttttgacatcagccacagt
caaggtgaagctacggttgcgtcctgtgtggtttttggcagggaaggacctctgaaaagt
gactatcgtcgtttcaatattacaggtatcactggtggtgatgactacgcggcgatggaa
caagctctaacccgtagatacaaacgactcatggttgaagagcacaaactgccgactatt
ttaatggtcgatggtggtaaggggcagttgaatgtggctcggcgggtcatggacgaacta
caaatgaatcagacattgctgatgggcatcgccaaaggggaagggcgtaagccagggctt
gaaacactatatctgcaagatgccgaacatacactggaattggagaagcattcaccggcg
tttcatctattgcagcatatcagggatgaagcgcatcgattcgctataactggtcatcga
ggcaagcgtggcaaagcacgaacgggttcgttgctggacgatatcccaggaataggggct
gagcgccgtaaggcacttatccgttattttggaagtgcccgcggcgttatggcggccagc
gctgatgaaatcgcaaaagtaaaaggaataagtaagaccattgcacaaaacatttatgaa
tttttgcacaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (175)   
   KEGG ORTHOLOGY (1)   
   RefGene (172)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (187)   

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