KEGG   Geobacter sulfurreducens PCA: GSU3325
Entry
GSU3325           CDS       T00155                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
gsu  Geobacter sulfurreducens PCA
Pathway
gsu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GSU3325 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsu03400]
    GSU3325 (uvrA)
DNA repair and recombination proteins [BR:gsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GSU3325 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GSU3325 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 AAA_25 AAA_21 BCA_ABC_TP_C nSTAND3 AAA_14 DnaJ_CXXCXGXG AAA_18 ATPase AAA_22
Other DBs
NCBI-ProteinID: AAR36715
UniProt: Q747E2
Position
3652835..3655648
AA seq 937 aa
MAHDTIIVKGACEHNLKCIDVEIPRDKLVVITGISGSGKSTLAFDTIYAEGQRRYVESLS
AYARQFLEQMEKPDVESIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYLRLLFARVGHP
HCYECGKPITSQTVSQMVDQIMALPAGTRLQLLSPMVRGRKGEYRKELAQLRKDGFARVI
VDGVQHELAEEIHLDKNKKHDIDIVVDRLIIKEGIERRLADSLETALNHAEGVVKVQVVD
GDTILFSEALACIDCGISYPEMTPRMFSFNNPYGACPDCTGLGTRMYFDEELVVPNPELS
IREGAIAPWEKRLSAWYHMTLDALAKAFDFDIRTPFKELSPRVREVILRGSKGEKVEFWW
EEDGGRRHTYTKEFEGVIPNLERRYRESDSEQVREELERYMNVMPCPTCQGARLKREALH
VKVAERDIRQVTALSIKDALEFFASLTLTPKEEEIARRILKEIRERLHFLVNVGLDYLSL
DRTSGTLSGGEGQRIRLATQIGSSLVGVLYILDEPSIGLHQRDNGRLLQTLKHLRDIGNT
VLVVEHDEETILEADHVLDMGPGAGEHGGRVVAQGTPAEIMANPESLTGRYLSGELTIAV
PKKRRKPKRFITVEGAAENNLKDVTVDIPLGVMTCVTGVSGSGKSTLVIDTLYKVLGQRL
YRSRERAGAVRDIRGLEQLDKVINIDQSPIGRTPRSNPATYTGVFADIRDLFAQLPESKV
RGYKPGRYSFNVKGGRCEACAGDGIIKIEMHFLPDVYVQCEVCKGARYNRETLEVTYKGK
SIAQVLDMTVSEALRFLENIPKVKAKLQTLEEVGLGYIRLGQSATTLSGGEAQRVKLAKE
LARRATGRTIYILDEPTTGLHFHDIAKLLEVLRKLVEGGNTIVIIEHNLDVIKTADYIID
LGPEGGDRGGEVIATGTPEEVAKVTRSYTGQYLRKML
NT seq 2814 nt   +upstreamnt  +downstreamnt
atggcacacgacaccatcatcgtcaaaggcgcgtgcgaacataacctcaagtgcatcgac
gtggagatccctcgggacaagctcgtcgtcatcaccggcatttccgggtcgggaaaatcg
accctggccttcgataccatctatgccgaagggcagcgccgctacgtggaatccctctcg
gcctatgcccgccagtttctggagcagatggagaagcccgacgtggaatccattgagggg
ctttcccctgccatctccatcgaacagaagaccaccagccgcaacccccgctccaccgtg
ggaaccgtcaccgagatctacgactaccttcggctcctcttcgcccgcgtcggccacccc
cactgctatgaatgcggcaaaccgatcacctcccagactgtctcccagatggtggaccag
atcatggccttgcccgccggaaccaggcttcagcttctctcgcccatggtccggggtcgc
aagggggagtaccgcaaggaactggcccagttgcgcaaggacggcttcgcccgggtcatc
gtggatggcgtgcagcatgagctggccgaggagattcacctcgacaaaaacaagaaacac
gatatcgatatcgtggtggatcgactcattatcaaggagggaatcgagcggcgcctggcc
gactccctggaaacggccctgaaccacgcggaaggggtggtaaaggtccaggtcgtggac
ggcgacaccatccttttctccgaggcactggcctgcatcgactgcggcatctcctacccc
gagatgaccccccggatgttctcattcaacaacccctacggcgcctgccccgactgcacc
ggcctcggcacgcggatgtacttcgacgaggaactggtcgtgccgaacccggaactctcc
atccgcgaaggagccatcgccccatgggagaaacggctctcggcctggtaccacatgact
ctggacgccctggccaaggcctttgacttcgacatccggacccccttcaaagagctctct
ccccgggtgcgcgaggtgatcctgcgcggatccaaaggcgaaaaagttgagttctggtgg
gaagaggacggtgggcggcgtcacacctacaccaaggaattcgaaggggtcatccccaat
ctggagcggcgctaccgggaaagcgactcggagcaggtgcgggaagagctggagcgctac
atgaacgtaatgccctgccccacctgccagggggcgcgcctgaagcgcgaggcccttcac
gtgaaggtggcggagcgggacatccgtcaggtaaccgctctctccatcaaggacgccttg
gagtttttcgcctccctcacgctcaccccgaaagaggaggagatcgcccgccgcatcctg
aaagaaatcagggagcggctccacttcctagttaacgtgggactcgactacctgtccctg
gaccggacctcgggcaccctctccggcggtgaagggcagcggatccggctcgccacccag
atcggctccagcctcgtgggggttctctacatcctggacgagccctccatcggcctgcac
cagcgggacaacggccgactgttgcagaccctcaagcacctgcgcgacatcggcaacacg
gtgctggtggtggagcacgacgaggagacgatcctggaggcggaccacgtgctcgacatg
gggcccggcgccggtgagcacgggggccgcgtggtggcccagggaaccccggcggagatc
atggcgaaccccgagtccctcacgggccgctatctctcaggagagctcaccatcgccgtg
cctaaaaagcggcgcaagcccaagcgcttcatcaccgtggagggagccgcggaaaacaac
ctgaaggatgtcaccgtcgacatccccctcggtgtcatgacctgcgtcaccggggtgtcc
gggtcgggcaaatcgacactcgtgatcgacaccctctacaaagtcctgggccagcggctc
taccggagccgggagcgggccggcgcagtacgcgacatccggggactggaacaactggac
aaggtcatcaacatcgaccagtcgcccatcggccgcacgccgcgctcgaaccccgccacc
tacaccggggtcttcgccgatatccgggatctcttcgcccaactccccgaatccaaggtg
cggggctataagccggggcgctactcgttcaacgtgaaggggggacggtgcgaggcctgc
gccggggacgggatcatcaagatcgagatgcactttctccccgatgtctacgtccagtgt
gaggtctgcaagggagcccgctataaccgcgagaccctggaggttacctacaaggggaaa
tccatcgcgcaggtcctggacatgaccgtttcggaggccctgcgcttcctggagaacatc
ccgaaggtcaaggcaaagctccagaccctggaggaggtggggctcggctacatccgcctg
ggccaatcggccacgaccctatccggcggcgaggcccagcgggtgaaactggccaaggaa
ctggcgcgccgggccaccggccgaaccatctacatcctcgacgagcccaccaccggcctt
cacttccacgacatcgccaagctcctggaggtgctaagaaaactggtggaggggggaaat
accatcgtcatcatcgagcacaacctggacgtcatcaagaccgccgattacatcatcgac
ctgggccccgaagggggcgaccggggcggcgaggtgatcgccaccggcacacctgaggag
gtggccaaggtgacacggtcctacacgggacagtatttgcggaagatgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (15)   
   Pfam (15)   
All databases (51)   

Download RDF
DBGET integrated database retrieval system