KEGG   Gordonia terrae: BCM27_21150
Entry
BCM27_21150       CDS       T04440                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
gta  Gordonia terrae
Brite
KEGG Orthology (KO) [BR:gta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gta03021]
    BCM27_21150
Transcription machinery [BR:gta03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BCM27_21150
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_38 HTH_24 HTH_23 HTH_17 AbiEi_1 UPF0122 TnsD
Other DBs
NCBI-ProteinID: ANY24981
UniProt: A0A4V0B2S8
Position
4776489..4777043
AA seq 184 aa
MKDTDLSALLARVATGDMDAFAQFYDATCDRVYGMTLRVLRDPGYSEEATQETFLAVWRN
ADAYDPASGSALSWILTLAHRRAVDRVRSESAATRRTVAYGIADTGREVDEVSESVERRE
IARLIHTGLETLTPLQRQAIELAYFHGLTYREVAEHLEVALPTVKSRIRDGLIRLRQTVP
GRAA
NT seq 555 nt   +upstreamnt  +downstreamnt
atgaaagacaccgatctgagcgccctcctcgcccgggtggccaccggcgacatggacgcc
ttcgcccagttctacgacgcgacctgcgatcgggtgtacggcatgacactgcgcgtgctc
cgcgacccgggctacagcgaagaggcgacgcaggagaccttcctcgcggtgtggcgcaac
gccgatgcctacgacccggcatccggttcggcgctctcctggatactgacgctcgcgcac
cgccgagccgtcgaccgtgtccgctcggaatccgccgcgactcggcgcaccgtcgcctat
ggcatcgccgacaccggccgagaggtcgatgaggtcagcgagtcggtggagcgacgcgag
atcgcccgtctcatccacaccggcctggagaccctcacaccgctgcagcgacaggccatc
gaactcgcctacttccacgggctcacctaccgcgaggtcgccgaacatctcgaggtcgcc
ctgccgaccgtcaagtcccgcatccgcgacggcctgatccgactgcggcagaccgtgccc
ggccgcgccgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (18)   

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