KEGG   Parageobacillus thermoglucosidasius C56-YS93: Geoth_2801
Entry
Geoth_2801        CDS       T01531                                 
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
gth  Parageobacillus thermoglucosidasius C56-YS93
Pathway
gth00300  Lysine biosynthesis
gth00550  Peptidoglycan biosynthesis
gth01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gth00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Geoth_2801
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Geoth_2801
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:gth01011]
    Geoth_2801
Enzymes [BR:gth01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     Geoth_2801
Peptidoglycan biosynthesis and degradation proteins [BR:gth01011]
 Precursor biosynthesis
  Amino acid ligase
   Geoth_2801
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase Glyco_tranf_2_3 RraA-like YqeC
Other DBs
NCBI-ProteinID: AEH48689
Position
complement(2735626..2737098)
AA seq 490 aa
MKLQTLLSYLHDLTPYVGENPTITSIEMDSRQVKKGALFICIKGFTVDGHDFAKQAVENG
AVAIIAERPLDVDVPVIVVRDSRRAMAVLADAFYGQPTHRLHLIGVTGTNGKTTTTHIIE
QIVRKANKKTGLIGTVHIKIGDDAYPTQNTTPESLLLQRTFKQMADEGVDVAIMEVSSHA
LHMGRVHGCDYDVAVFTNLTQDHLDYHGTMEEYRNAKGLLFAQLGNRYDHERPKFAVLNN
DDPASQYYKHMTAATVITYGTKTDSDIMAKRIDIVPNGMAFDLITPHGTARVKTKLIGLF
NVYNLLAAVSACLVSGIPFPVIVEAIEEISGVAGRFETVDEGQDFTVIVDYAHTPDSLEN
VLKTAQQFARKNVYVVVGCGGDRDRTKRPLMAKVAVQYADVAIFTSDNPRSEDPEQILRD
MEAGVPGERYVTIVDRKEAIYYAIEQAQEGDIVLIAGKGHETYQIIGDRVIAFDDRLVAR
EAIKERKKIC
NT seq 1473 nt   +upstreamnt  +downstreamnt
gtgaagctgcagacgctgctttcgtatttgcatgatttaacaccatatgtcggcgaaaac
ccgacgatcacttccattgaaatggattcgcgacaagtaaaaaaaggggcattgtttatt
tgcatcaaagggtttaccgtcgatgggcacgattttgcgaaacaggcagtagaaaacggg
gctgtagcaatcattgccgaacgccctctcgatgtcgatgtgcctgtgattgtcgtccgc
gatagccggcgggcgatggcagtgctcgccgatgcgttttacgggcagccgacccatcgg
ttgcatttgatcggcgttacgggcacaaacggaaaaacgacaacgactcatataatagag
cagattgtaagaaaggcaaataaaaaaacagggttaatcgggacggtacatattaaaatt
ggcgatgatgcgtatccaacgcaaaatacgacgcccgaatcgctgctgttgcagcggacg
tttaagcagatggccgacgaaggagtcgatgttgccatcatggaagtgtcttcacatgcc
cttcatatggggcgcgtgcacggttgtgactatgatgttgccgtgtttaccaatttaacg
caagatcatctcgattaccatgggacgatggaagaatatcgcaatgcgaaagggctgcta
tttgcccagcttggaaatcgttatgaccatgagcgtcctaagtttgcggtgttaaacaat
gatgatcctgcttcacaatactataagcatatgacggcagcgaccgtgattacatacgga
acgaaaacagacagcgatattatggcaaagcggattgatatcgtcccgaacggaatggcg
tttgatctgatcacaccgcacggtacggcccgcgttaaaacgaaattaatcggattgttt
aatgtatataatttacttgcagccgtttccgcttgtcttgtatcagggattccatttcct
gttattgtggaggcgattgaagaaatttccggagttgcgggacggtttgaaacagtcgat
gaagggcaagactttacagtaatcgtagattatgcccatacgccagatagcttggaaaat
gtcttaaaaacggctcagcaatttgcccggaaaaacgtttatgttgttgttggctgcggc
ggcgaccgagatcgtacaaaacggccgctgatggcaaaagtggcggtccaatacgccgat
gtggccattttcacttctgacaacccgcgttccgaagatcctgagcaaattttgcgtgat
atggaagcaggcgttcccggggagcgttatgtgacgatcgtggaccgcaaagaggcgatt
tattacgcgattgaacaagcgcaagaaggcgacattgttttaatcgcgggcaaagggcat
gaaacgtatcaaatcatcggtgatcgcgtcattgcttttgatgaccggcttgttgccagg
gaagcgattaaggagcggaagaagatatgctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (33)   

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