KEGG   Geovibrio thiophilus: EP073_07420
Entry
EP073_07420       CDS       T05803                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
gtl  Geovibrio thiophilus
Brite
KEGG Orthology (KO) [BR:gtl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gtl03016]
    EP073_07420
Enzymes [BR:gtl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     EP073_07420
Transfer RNA biogenesis [BR:gtl03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    EP073_07420
 Prokaryotic type
    EP073_07420
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Reo_sigma1
Other DBs
NCBI-ProteinID: QAR33235
UniProt: A0A410JYT8
Position
1563962..1564966
AA seq 334 aa
MKNNFSVVQVNSPFEDTAFFVRNIYKKNAFLLDCGKIGSLTNQEVLSIYDIFISHTHIDH
FYGFDRILRGSLMAEKTIRIFGPPGIIKNVRGKLDSYTWNLIKSYAINFDVIELSETRLH
KRALFMAENGFEGIYSEILHDDIDLGEGFTFDFVFFEHRVTSVGYRIKEKPLISADGELM
EKSGFRPGKWVGQLKKKVENGYPHDETIDVQTADGFVSVTVSELEAKFITKHYPQDITFV
TDIAPSYSNYLKAIEFAKGAKSLLIEGVFMKEDILHAIDKQHLTLDLAKTIYARSGAEKV
RFFHFAPRYDRDRGPFLKRLYDGFDGEILEVEVR
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgaagaataacttttccgtggtgcaggtaaactccccgtttgaggatacggcgtttttt
gtccgcaatatatataaaaaaaacgcgtttctgctggactgcggcaaaataggctcactg
accaatcaggaagtactgagcatttatgatatattcataagccacactcacatagaccat
ttttacggattcgaccgcatactgcgcggctcgcttatggcggagaaaaccatcaggatt
ttcggtccgccggggataataaaaaacgttcggggtaagctggattcatacacatggaac
ctgattaaaagctacgcaattaattttgatgtgatagaactcagcgagacaaggcttcac
aaacgtgccctgtttatggctgagaacggctttgaaggcatttactctgagatacttcat
gatgacatagatttgggagagggcttcacattcgatttcgtattctttgaacacagggta
acgtctgtgggctaccgaataaaggagaagccgctgatctctgcggacggagagctcatg
gagaagtcgggctttcgtccgggcaaatgggtggggcagcttaagaaaaaggttgagaac
ggctacccgcatgatgaaaccatagatgtccagacggcagacggttttgtgtctgtgact
gtttctgagcttgaggcgaaattcattacaaaacattatccgcaggatataactttcgta
acggacatagcgcccagctactccaactacctgaaagccatagagtttgcgaagggagca
aaatctcttctcatagaaggggtttttatgaaggaggacattctccacgccatagataag
cagcacctcacccttgatctggcgaaaactatttacgccagatccggcgctgaaaaagtg
cgtttttttcacttcgctccaagatacgaccgtgacagaggaccttttctgaaaaggctt
tatgacggttttgacggtgaaatacttgaggttgaggtaagatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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