KEGG   Gloeophyllum trabeum: GLOTRDRAFT_113879
Entry
GLOTRDRAFT_113879 CDS       T03130                                 
Name
(RefSeq) zf-U1-domain-containing protein
  KO
K11095  U1 small nuclear ribonucleoprotein C
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    GLOTRDRAFT_113879
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gtr03041]
    GLOTRDRAFT_113879
Spliceosome [BR:gtr03041]
 Complex A
  U1 snRNP components
   U1 snRNP specific factors
    GLOTRDRAFT_113879
 Complex B
    GLOTRDRAFT_113879
SSDB
Motif
Pfam: zf-U1 CLIP1_ZNF
Other DBs
NCBI-GeneID: 19299801
NCBI-ProteinID: XP_007862153
JGI: Glotr1_1_113879
UniProt: S7S050
Position
Unknown
AA seq 215 aa
MPKHYCDYCDVFLTHDSASVRKAHNSGRNHLANVRDYYASLGHDKAQSIIDQITAAYESS
GGPPPGGFGFGPQHLGPPAPFAGPPGFGGPPPGFGGPPPGFGGPRPPFPPGPGFPPMGAP
GAPPFPPSMPPPGMAGPPGAGPPPFAPNAQGLSGGPPPFPPNFQSPPPGQGPPGGNFGNA
PFNGPGQSQGPPSASSGPPGPGGIHPDRLRMMNGR
NT seq 648 nt   +upstreamnt  +downstreamnt
atgcctaaacactactgcgattactgtgatgtcttcttgactcacgactcggcttcggtg
cgtaaagcccataatagcgggcgtaatcaccttgcaaatgttcgggactactatgcctcc
ctcggtcacgacaaggcgcagagtataattgaccagatcacagccgcctatgaatcgagc
ggtggacctccgcctggtgggtttgggtttgggccgcagcacttggggccacctgcgccg
ttcgctggcccccctggcttcggcggcccccctccaggtttcggggggcctccccccggt
ttcggtggaccccggcctcccttccctcccgggcctggtttcccgcctatgggtgcacct
ggtgcacctccattccctccaagtatgcctcccccaggaatggccggccctcccggcgca
ggaccacctccgttcgcaccgaatgctcaaggtctttcaggcggtcctcctcccttccct
cccaattttcaatcgccccctcctggccaaggacctccgggtgggaacttcggtaacgcc
ccatttaatggaccaggtcagtcacagggcccaccttccgcttcgagtggacctcctggc
ccgggcggtatacatcctgaccgtctcagaatgatgaacgggaggtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

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