KEGG   Gloeophyllum trabeum: GLOTRDRAFT_34951
Entry
GLOTRDRAFT_34951  CDS       T03130                                 
Name
(RefSeq) DNA replication factor C, large subunit
  KO
K10754  replication factor C subunit 1
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03030  DNA replication
gtr03410  Base excision repair
gtr03420  Nucleotide excision repair
gtr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GLOTRDRAFT_34951
   03410 Base excision repair
    GLOTRDRAFT_34951
   03420 Nucleotide excision repair
    GLOTRDRAFT_34951
   03430 Mismatch repair
    GLOTRDRAFT_34951
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gtr03032]
    GLOTRDRAFT_34951
   03400 DNA repair and recombination proteins [BR:gtr03400]
    GLOTRDRAFT_34951
DNA replication proteins [BR:gtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    GLOTRDRAFT_34951
DNA repair and recombination proteins [BR:gtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     GLOTRDRAFT_34951
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 nSTAND3 AAA_22 AAA_14 AAA_18 AAA_16 NTPase_1 AAA_5 AAA_assoc_2 RuvB_N AAA_30 RNA_helicase AAA_24 AAA_33 AAA_7
Other DBs
NCBI-GeneID: 19305591
NCBI-ProteinID: XP_007861795
JGI: Glotr1_1_34951
UniProt: S7S227
Position
Unknown
AA seq 721 aa
MAGPRAPGSKAVPEPQCAEPLAGLAFVFSGELSSFSRDEAVDLAKRFGGRVTGQPSSRTS
YVVLGDDAGPSKLAAIKKHNLRTLSEDEFLQLIATRNPGGGELDEKTRKKKEKEQDAIRE
GAREMEKREKAAMKEAKAGSVGSAKAVDTSTQLWTVRYAPQTLKEICGNKGQVEKLLLWL
QDWPKSLKSGFSKPGKNGMNIFRAVMITGPPGIGKTTSAHLCAKLAGFTPIELNASDARS
KKLVELVIDSHKPNQKTNAAGVEISDKSCLIMDEVDGMSAGDRGGVGALNQLIKKTKIPI
ICIANDRQAQKLKPLIATTYSLPFKKPDAAAVRSRILTVAYKEKMKIPANVVDQLVAGAQ
SDIRQVLNMLSTWKLSSSTMDFDESKELVKMNEKYAIMTPFNVTYKILGPYTFSPTSRET
LGDKMELYFHDFSFVPLFIQAPENYLKTQPVKVRNLAGPEKDLKELELMDKAATSISDGD
LVDGLIHGSVPRVVDLRSLICKVCRSEQHWSLMPLHAVLSTVRPASFIYGNCQQWLGQNS
KQNKLSRQLNDVQVRMRLKVSGDKSEVRQSYIPALFPVIVKPLMDVGASAVDEVIDRMDD
YYLSKEDWDTIVELGVDQNKDELVLKKIPAATKTALTRKYNSREHPIPFHKAQDLGKAPK
KIAASEVPDLEEAFDVDEDVPEEVVEDDQGEDEDVSKDKLIKMPKANKGKPAAAKAKGKK
G
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggcgggcccgagggcgccggggtcgaaagcggtgccggagccgcagtgcgcggagccg
cttgccgggctcgcgttcgtcttctcgggcgagctgagcagcttctcgcgtgacgaggcc
gtcgacctcgcgaagcgtttcggcggtcgcgtgacaggccagccctcgtccagaacctcg
tacgtagtcctgggcgatgacgcgggcccgagcaagctcgccgcgatcaagaagcacaac
ctgcgcacgctctcggaggacgagttcctgcagctgatcgccacgcgcaatcccggcggg
ggcgagctggacgagaagacgcgcaagaagaaggagaaggagcaggacgcaatccgcgag
ggcgcgcgcgagatggagaagcgcgagaaggcggcgatgaaggaggcgaaggcgggcagt
gttgggagcgcgaaggcggtagatacgtctacgcagctgtggacggtgcggtacgccccg
cagacgctgaaggagatatgcgggaacaagggccaagtcgagaagctcctcctttggctg
caggactggccgaagagcctgaagagcggattcagcaagcctggcaagaacggcatgaac
atcttccgggcggtgatgattacgggaccgcccgggattgggaagacgacgagcgcacat
ctatgcgcaaagctggcgggattcacgcccattgagctgaacgccagcgacgcacggagt
aagaagctcgtagagctggttattgactctcacaaacccaatcagaaaactaatgctgcc
ggcgtcgagatttctgacaagtcttgcctcatcatggatgaagtcgatggtatgtccgct
ggcgaccgtggcggagtgggtgcattgaatcagctcattaagaagacgaagatcccgatc
atctgtatcgcgaatgatagacaagcgcagaagctcaagccgctcattgctacgacctat
agcttaccgttcaaaaaacccgatgctgcggctgtccgatcgcggattctgactgtggct
tacaaggagaagatgaaaatccctgccaacgtcgtcgaccaactagtcgccggagcgcag
tccgatattcggcaggtactcaatatgttgtccacgtggaagctatccagtagtacgatg
gactttgacgagagcaaagaacttgtcaagatgaacgagaaatacgccatcatgactcct
ttcaacgtgacgtacaagatccttggaccgtatacattctctcctacttctcgggagaca
ctgggggataagatggaattgtatttccatgatttctcttttgttccactattcatccag
gcacctgagaattatctgaagacgcagcccgtgaaagtcaggaacctagctggcccagaa
aaggacctcaaagaactcgagctcatggataaggcagccacttcaatctcggatggcgac
ctagtcgatggattgatccatgggtcagtgccaagggtggtcgacttgcgctctctaatt
tgcaaagtttgtagatctgagcaacattggtcgctgatgccactgcatgccgtcctgtct
acagtgcgcccggcttcattcatatatgggaattgccaacaatggctgggccagaactcg
aaacagaacaaactgtcccgacagctgaatgacgtgcaggtgaggatgcgcctgaaggtc
tctggtgacaagtccgaggtccggcagtcatatatccccgcgctgttccctgtcatagtg
aagccattgatggatgtcggagcaagtgccgtggacgaggttatcgacagaatggacgac
tactacctgtcgaaggaggactgggatactattgtcgaattgggagtggatcaaaacaaa
gacgagctcgtgctcaaaaagatccctgctgcaacaaagactgcgctcactaggaagtat
aattctagagagcatcccataccgttccacaaggcgcaagacttgggtaaggcgccgaag
aaaatcgccgcctctgaagtgccagatctggaagaagcatttgacgtggacgaggacgtc
cctgaagaggtcgttgaggacgatcaaggcgaggatgaggacgtcagcaaggacaaactt
ataaagatgccgaaggcgaataaagggaaacccgctgcggccaaagccaaggggaagaaa
ggctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (58)   

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