KEGG   Gloeophyllum trabeum: GLOTRDRAFT_56229
Entry
GLOTRDRAFT_56229  CDS       T03130                                 
Name
(RefSeq) YVTN repeat-like/Quino protein amine dehydrogenase
  KO
K03361  F-box and WD-40 domain protein CDC4
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr04111  Cell cycle - yeast
gtr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    GLOTRDRAFT_56229
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    GLOTRDRAFT_56229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gtr04121]
    GLOTRDRAFT_56229
Ubiquitin system [BR:gtr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Target recognizing subunit (F-box)
     GLOTRDRAFT_56229
SSDB
Motif
Pfam: WD40 F-box-like NBCH_WD40 F-box Nup160 PALB2_WD40 DUF2267
Other DBs
NCBI-GeneID: 19307096
NCBI-ProteinID: XP_007862986
JGI: Glotr1_1_56229
UniProt: S7QEE0
Position
Unknown
AA seq 803 aa
MQEDQTYVGGNGWRMLRRDEDVDASKTVGLTEAIERFGRKRSYVSESMMEGVEMTNDFGA
STPPRKKPRGAPVPPISTVNAAAPPSPLPSPHGSPPPESTLPSAPPSVAGSPQAQPPIQP
DLSLTTLLTLPSLLSHFAALPPNLQSHVLLTFLRHSPLSVLRTLHSVLTPTLARDFLTQL
PPELVSHILSFLPFPTLARASRVSKAWRATIDSDPVLWRDLLKSTKIWFGGDSERAFAQA
IMARRRRNQLPVPDSLPLPHPYKILFKSRHLTRTRWIQNDNPKRLTFPAHGHAVVTCLIF
SHDRIISASDDHSIHVYSPKTGQLIRALEGHGGGVWALAATQNTLVSGSTDRTVRIWDLS
NGRCTHVFGGHTSTVRCLAIVKPEWLDIEDEDGVITREKWPKQPLIVTGSRDHSLRVWQL
PRPGDDEYRYYGADEAEVDPADEDVEDNPYHKLHLEGHEHAVRALAARGRTLVSGSYDCT
VRVWDIITGKCRWVLQGHTQRVYSVVLDMARNQACSGSMDGTVRIWNLQNGQCRHLLMGH
TSLVGLLGLSPSHLVSAAADSSLRVWDPETGELQHTLAAHTGAITCFQHDEFKVLSGSDG
TLKMWNIRDGSVVRDLLTGITGVWQVVFEGRWCVAASNSGGDGTVLDVWDFAEEGDEDWI
GEPPGGIYDDNTEDEDEDRADTDMMDQDGEIEIVPSEPDADEDDVEQDVEPYEDADEEDH
RSEVNSQLMDTEDAPPLPRPSGSTSRASSHHSRGSARPGSSALVPSASRIRSRAVPSGQT
RHLPNNDETPTRPRTRHIGGRRR
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgcaggaagatcagacgtatgttggcggaaacggctggcgtatgctgcgacgcgacgaa
gatgtcgacgcgtcaaagacagtcggcctgacggaggccatcgagcggtttggcagaaag
cggtcctacgtcagtgagagcatgatggagggtgtcgagatgacgaatgactttggcgca
agtacgcctcctcgtaagaaacctagaggtgctcctgtccctcctatatctacggtcaat
gctgccgcgcccccttcaccccttccgtctcctcatggctctcctcctcccgaaagtact
ttgccatctgctcctcccagcgtcgctggttcgccacaggcgcagccacccatacagccg
gacctgtctctaacaaccctcttgactctgccatcccttctctcccattttgccgcatta
ccaccaaatctacagtcccacgttcttttgactttcctaaggcactctccactttcagta
ctgcggacattgcattcagtccttacgcctacgttagcgcgtgacttcctgacccagcta
ccccccgaattggtctcccacatcctcagttttctcccattcccgacattggcgcgtgct
tctcgagtttccaaggcctggcgtgctaccattgactctgaccctgttctttggcgcgac
ctcctcaagagtaccaagatctggtttggcggcgactcggagcgggcctttgcacaggcg
atcatggcgcgccggcggcgaaaccagctccctgttccggattctctaccacttccgcat
ccctacaagatcctattcaagtcacggcatctaactcgcactcggtggattcagaacgat
aacccgaaacggctgacgttccctgctcatggacacgctgtggtgacttgtctcattttc
tctcacgaccgcatcatctcggcttccgacgaccactccatacatgtgtattcacccaag
acaggtcagctaatccgcgctctcgaaggacatggagggggcgtgtgggccctcgctgcg
acacagaacactcttgtcagcggatctacggatcgtactgtacggatatgggatctgagt
aacggaaggtgtactcacgttttcggaggccacacgagtactgtgcgatgcttagctatt
gttaagccagaatggttggatatcgaggatgaggatggagttattactagggagaagtgg
ccgaaacagccgctcatcgttactggcagtcgagaccattccttgcgggtctggcagtta
ccaagaccaggcgacgacgagtacagatactacggcgctgatgaagcggaagtggatcct
gccgatgaggacgtggaggacaatccctaccacaaacttcatttggaaggccatgagcat
gctgtccgtgccctcgcggctagaggtcgtacgctggtatccggtagttacgactgcacg
gtccgcgtctgggatataatcaccgggaaatgtagatgggttttgcagggccacacacaa
agagtgtatagcgttgtgctcgacatggcccgcaaccaggcgtgctcgggctccatggac
gggacggtccgtatatggaacttgcagaatggccaatgtcgccatttgctcatgggacac
acatccttggttggtctcctaggtctttcaccttcccacctcgtctcggccgcagccgat
tccagtttgcgtgtctgggacccggagaccggcgagttgcagcatacactcgctgcccac
accggggctatcacgtgcttccagcacgatgagttcaaggtcctcagtggatcggacggt
acgctgaagatgtggaatatccgagatggcagcgtggttcgcgatctgctcactgggatc
actggtgtctggcaagtcgtcttcgaaggccgatggtgcgtcgccgctagcaatagcggt
ggcgatgggacagtcctcgacgtctgggatttcgctgaggagggagatgaagactggatt
ggcgagccccctggcggtatctacgacgataacaccgaggatgaagatgaagatcgggcg
gataccgacatgatggaccaggacggcgagatcgagattgtcccgtcggagcctgacgca
gacgaagacgatgtggaacaggatgtggagccttacgaagatgctgacgaggaagaccat
agatcagaggtcaacagccagctgatggatactgaggatgccccgccgcttcctcgaccg
tctggttcgacatctcgtgcttcgtcgcaccatagcaggggatccgctagacctggttca
tccgctttggtcccatcagcctcgcggatacgcagcagagcagtcccgtcgggtcagacg
cgacacttgccaaataacgacgagactcccactagaccaaggacgcggcatataggtggt
cgtagacggtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (47)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (62)   

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