KEGG   Guillardia theta: GUITHDRAFT_117170
Entry
GUITHDRAFT_117170 CDS       T02925                                 
Name
(RefSeq) hypothetical protein
  KO
K15172  transcription elongation factor SPT5
Organism
gtt  Guillardia theta
Pathway
gtt03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    GUITHDRAFT_117170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtt03021]
    GUITHDRAFT_117170
   03019 Messenger RNA biogenesis [BR:gtt03019]
    GUITHDRAFT_117170
Transcription machinery [BR:gtt03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     GUITHDRAFT_117170
  RNA polymerase I system
     GUITHDRAFT_117170
Messenger RNA biogenesis [BR:gtt03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     GUITHDRAFT_117170
SSDB
Motif
Pfam: KOW Spt5-NGN
Other DBs
NCBI-GeneID: 17293405
NCBI-ProteinID: XP_005823605
JGI: Guith1_117170
UniProt: L1ILF1
Position
Unknown
AA seq 1042 aa
MVESDSDDDRRASKDRKNSDAEEDDDEDEEVEADEESEEEDEREESRGKKKGKRSRSYYV
DDAADDDDDEEEEEDDRKKRKKSKKSRRDEDSDGEEELSDNEAEKMAAQMRNSYRRHDFL
TADLTQEDLDARYRGAMHDDEALDGITDENVKNARLPDATKDPKVWCIKVANGTEKTLVI
QLMNKFVTLAKEGKPIHITCAYWNEQSLGYIYVEAYKEAFVKEALSGLRGVYATKMKLVP
VKEMTDTVVIIKKSLSAQPGGWARVRRGKYKGDIVQVLAVEHNRNEVEVKLVPRVDTNDY
SAFDDSEAKKRRSKFIPPRRLFNPDNYGESDLDKWGIENHRDQSSGDNVYTVDGDFTFTG
GGFVKKWFAVKSLTLGSDIQPELDDLKIFEQDAKTEDGLPNRSMTHLTSIHKRKVILNKG
DVVRVKEGELRDLLGDVDSIDGKRVIIRPRHEAIKQKLEFNMEELEKYFEAGDHVKVVNG
RRAGVTGTVVRVEGETIYILTDVNREEILVFSSDLQDTNEVSSGLDVVGAFRLYDLVLLE
SASSSMTMPSVGVVVQLEKDTLQVLDNYGKIRAVRPADVQPHKKSATAVALDGEQQTIAQ
GDVVRVVGDGPMKGKTGTVRHIFRAFLFLYSPARMENAGMFVMRSRQCVLMGQSKHKEND
PTNTLGGAASLIPGRMGDAGRGGFPGGMGGAGAMQPGGFRAAGRGRGASWEGKRVRIIRG
FDKGKVGTVKEETDAICRVELDATHKKVAVKKTDVVDLVDEKRVIPSHMAIPQTPSSDHF
QAGSQTPAWTPSTPAHDGSQTPNPYAEPGTPSTPRNFFDPNTPGTPMHDSTSWDAGTPAT
PGAYASPYEHPAATPATPTAYGGYSSNYVQTPGALNPTTPGEGASPFTPSTPGGYASYGY
GQGNWQTGQTPFDQGTPQTPATPGGDFPVRAAPQVSNWCLKRIEVRIVSGEFIDRTGVVV
EVKGPDCKVEMQGGQSTMVPAEDLEAVVPQKNSSVIILQGELKGSTGKLIGIDGRDGIVK
MDLNSDIKIIDMPLLAVHVPEA
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggtagagtccgacagtgatgacgatagacgtgcttccaaggacaggaagaactcagac
gcagaagaggacgacgacgaagacgaggaggtagaggctgatgaagaaagtgaggaggaa
gacgaacgcgaggagtcgagaggtaagaagaaaggaaaacgatcacgctcgtactacgtg
gacgacgctgctgacgatgacgacgatgaggaggaggaggaagatgacagaaagaagagg
aagaagtcaaagaaatctcgaagagatgaagatagtgatggagaagaagaactcagcgac
aacgaggctgaaaagatggctgcacagatgcgcaacagttacaggaggcacgacttctta
actgccgatctgacacaagaggatcttgatgccagataccgcggcgccatgcatgatgat
gaagctctagacggcatcaccgacgagaacgtcaagaacgcaaggcttcctgatgcaacc
aaagacccaaaagtgtggtgtattaaagttgccaatggaactgagaagacgctggtgatt
cagctaatgaacaagtttgtcacgttggccaaagaaggcaaaccgattcatattacttgc
gcatactggaacgaacagtctctcggctacatctatgtcgaggcgtacaaggaggcattt
gtcaaggaggctctcagcggccttcgaggagtctacgccacaaagatgaagcttgttccc
gtgaaggagatgacagacaccgtcgtcatcatcaagaagtctctcagcgctcagcctggt
ggttgggcgcgtgtccgacgtggcaagtacaagggagacatcgtgcaagtgctggctgtc
gaacacaaccggaatgaggtggaagtcaaacttgtcccgagggttgacaccaacgactac
agcgccttcgatgattcagaggcgaagaaacgcaggtcaaagttcatcccgccgcgcagg
ctcttcaaccccgacaactacggcgagtctgatcttgacaagtggggaatcgagaatcat
cgagaccagagctctggagacaacgtttacactgttgacggcgattttaccttcaccggc
ggaggattcgtgaagaaatggtttgcagtcaagagtctcactctcgggagtgacatccaa
ccggagttagacgatctcaaaatctttgaacaagacgccaagactgaggacgggctcccg
aaccgatccatgacacacctgacgtctatccacaagcgcaaagttatcttgaacaaagga
gatgttgtgcgcgtgaaggaaggagagctgagagatttgctgggagacgtcgactcgata
gacggcaagagggtcatcattcggccgcgccacgaggcgatcaagcagaaattggagttc
aacatggaagagctcgagaaatacttcgaagctggtgaccatgtcaaggttgtcaatggc
agacgagcaggagtgactggaactgttgttcgagtggagggagagacgatttacatcctg
accgacgtcaaccgcgaggaaatcctcgtattctcttccgatctgcaggacaccaacgag
gtgagctcgggcctggatgtcgtcggcgctttccgcctctatgatcttgtcctgctcgaa
tctgcttcctcctcgatgacgatgccttctgtcggggtagtcgttcagctggagaaggat
acgcttcaagtcctcgacaactacgggaagatccgagctgtccgccctgctgatgtccag
ccgcacaagaagagcgccacagctgttgctcttgacggggagcagcagacgatcgcgcag
ggagacgtcgtgagggtcgtgggagatggcccgatgaagggcaagacaggaactgtccgc
cacatcttccgcgccttcctgttcctgtattcgcctgcaaggatggagaatgcaggaatg
tttgtgatgaggtcgaggcagtgtgtgctgatgggtcagagtaagcacaaggaaaacgat
cccaccaacaccctcggcggagccgcttctctcatccctggccgtatgggagacgcgggg
agaggaggcttccctggaggcatgggaggagccggtgcgatgcagccaggaggcttcagg
gcagctgggagaggacgaggagcgtcatgggaggggaagcgagttcgaatcatccgaggt
ttcgacaaggggaaggtgggaactgtcaaggaggagacggacgcgatctgccgcgttgaa
cttgatgcgactcacaagaaggttgctgtgaagaagacggatgttgtcgatctcgtcgat
gagaagcgtgttatcccctcccacatggccatcccgcagactccctcctccgatcacttc
caggccggaagtcagacgcctgcatggactccttccactcctgctcacgatggcagccag
acgccgaacccttatgcggagccagggacgccttcaactcctcgtaacttcttcgatccc
aacactcctggtacccccatgcacgacagcacgtcatgggatgccgggactcctgctact
cctggagcctacgcctcaccctacgaacatcccgctgctaccccagctactcctacggca
tatggtggttacagcagcaactacgttcagacgcctggagctctcaacccaaccacccca
ggagaaggagcaagtcccttcactccatcgactcccggaggctatgcgtcctacggatac
ggccagggcaactggcagacaggtcaaactcccttcgaccagggtaccccgcaaactcct
gcgactcctggaggagactttcctgtcagagctgcaccgcaggtgtccaactggtgcctc
aagcgcattgaagtccggatcgtgtccggagagttcatcgatcgcaccggtgtcgtcgtc
gaagtcaagggccccgactgcaaagtcgagatgcaaggaggacagtcaacgatggtgccg
gcggaggacctcgaagcggttgtgccgcagaagaactcttccgtcattatcctacaggga
gagctcaaggggagcacaggaaagctcatcggtatcgatggaagagatggaatcgtcaag
atggatctcaactccgacatcaagatcatcgacatgcctctgctggcagtccatgtgccc
gaggcctag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (89)   
   KEGG ORTHOLOGY (1)   
   RefGene (84)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (99)   

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