KEGG   Guillardia theta: GUITHDRAFT_157206
Entry
GUITHDRAFT_157206 CDS       T02925                                 
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
gtt  Guillardia theta
Pathway
gtt03030  DNA replication
gtt03410  Base excision repair
gtt03420  Nucleotide excision repair
gtt03430  Mismatch repair
gtt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GUITHDRAFT_157206 (POLD1)
   03410 Base excision repair
    GUITHDRAFT_157206 (POLD1)
   03420 Nucleotide excision repair
    GUITHDRAFT_157206 (POLD1)
   03430 Mismatch repair
    GUITHDRAFT_157206 (POLD1)
   03440 Homologous recombination
    GUITHDRAFT_157206 (POLD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gtt03032]
    GUITHDRAFT_157206 (POLD1)
   03400 DNA repair and recombination proteins [BR:gtt03400]
    GUITHDRAFT_157206 (POLD1)
Enzymes [BR:gtt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GUITHDRAFT_157206 (POLD1)
DNA replication proteins [BR:gtt03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    GUITHDRAFT_157206 (POLD1)
DNA repair and recombination proteins [BR:gtt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      GUITHDRAFT_157206 (POLD1)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     GUITHDRAFT_157206 (POLD1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2
Other DBs
NCBI-GeneID: 17308334
NCBI-ProteinID: XP_005838630
JGI: Guith1_157206
UniProt: L1JTX0
Position
Unknown
AA seq 985 aa
MRLYGVTAEGHSAVVHVHGYDPYFYVQAPKEINENICQEIAETLNRRMAERVDSSKKTSN
GQYIRYVEMEYKQTIWNYRQEDFVKFLKISTVWPQHVTTARSILENGIQISNLGTRTFLT
YESNVVFVMRYMVDAGIVGANWITLPANQYLTRSNPNTTCQFEMDVMWQKLISHDPDGDW
LKIAPLRILSFDIECAGRKGCFPEPDKDPVIQIANWVTIQGMDTPIVKNIFTLKSCAAIS
GAEVHSFEDESEMLQGWRDFVIACDPDILTGYNIVGFDIPYLMDRAKALKVASFPVLGRM
KNSKTKIKKTTFSSAQMGTRETNEISIDGRVIFDVLQAIQREYKLHSYTLNSVCAKFLGE
QKEDVHHSIISDLQNGDAESRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPIG
WLLVRGQMLKVMSQLLRKARSKGLLLPNLKVESTDEKFEGAIVIEPKKGFYSDPIATLDF
ASLYPSIMMAHNLCYSTLVSKEDLRTNKFNFTPEQITVTPHGDTFVKPSVKKGILPEILD
ELLAARKRAKADLKKATDPIMKAVLDGRQLALKVSANSVYGFTGAQVGKLPCLEISSSVT
AFGREMIELTKAKVEAHYTVANGYKHDSVVVYGDTDSVMIKFGENRERWMIDETMKLALS
AADFVNTSFVKPIKLEFEKVYYPYLLMNKKRYAALLWTNPDKFDKMDCKGIETVRRDNCG
LVRTMVDTCLKTILMQRDPNAAAEYVKGVIRDLLMNKVDISELIITKALHKSEEDSKSAQ
AHVVLAARMKERDPNTAPVLGDRVPYVIIKGPKGAKAFEKAEDPIFVLENNLPIDVQHYL
DHQLSQPILRLFEPILDKPQSLLSGDHTRQISLSTPTTGGLMKFVKATKTCLGCRTPLKD
ERATVCEHCKPKEVLFKVAVRSIDNLNHMQTQFAKLWTQCQRCQGSLHMEVICTSRDCPI
FYRRRKAHKDLIEAQKTAERFSLSW
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgcgtttgtatggtgtcacggccgaagggcacagtgctgttgtacatgtccacggctat
gatccatacttctatgttcaggctccaaaggaaatcaacgaaaatatctgtcaagagatt
gctgaaactttgaaccgaagaatggcggaacgtgttgattcctcgaagaagacaagtaat
ggtcaatacattcggtacgttgagatggaatacaagcaaacaatctggaattatcgacaa
gaggactttgtcaaatttttgaagatttcaactgtatggccacagcatgtcactacagct
cgttcaatattggaaaatggaattcaaatatctaatctagggactcgcactttcttgact
tacgaatccaatgtcgtttttgtcatgcgctacatggtagatgctgggatcgtgggtgca
aactggattaccctcccagcaaaccagtacctaacgaggtcgaatccaaacacgacatgt
caatttgaaatggatgtcatgtggcaaaaattgatcagtcacgatccagatggagattgg
ttgaagattgctccactcagaattttgagttttgatattgagtgtgctggaagaaagggc
tgctttccagaacctgacaaggaccctgtcatccagattgcgaactgggttactatccaa
gggatggatacacctattgtcaaaaatattttcactctgaaatcttgcgctgcgataagc
ggtgcagaagtgcactcattcgaggatgaaagcgaaatgctccaaggctggagggacttt
gtcatcgcttgtgatccagacatattgactggatacaacattgtgggcttcgatattcca
tacctcatggacagagcgaaagcgctgaaggtcgcttcatttcccgttttgggcagaatg
aaaaatagcaaaaccaagatcaaaaagacaaccttttcttcagctcagatgggaacaagg
gagacaaatgaaatatcaattgatggaagggttatctttgatgtcctccaggcaattcaa
cgcgagtacaagttacattcatacactttgaattcagtttgtgccaagtttcttggagag
caaaaggaagacgttcatcattcaatcatctcagatttgcagaatggagatgctgaatcg
cgccgtcgccttgcagtatactgtctgaaggatgcatatcttcctcagcgtctcttggac
aaattgatgttcatttacaactacgttgaaatggcgagagtgacaggagtgcccattggt
tggctccttgttcgcggacagatgctcaaagttatgtctcagctactgcgcaaggcccgt
tccaagggcctactgctgccaaatttgaaggtagaatccaccgacgagaagtttgaaggt
gccattgttattgaacccaagaaaggcttctacagtgatcctattgcaactttggacttt
gcttcgctttacccctctatcatgatggcacataacctttgttattctactcttgtcagc
aaagaagacttgcgaacgaacaaatttaattttacgccggaacaaattactgtcactcca
catggtgacacctttgtcaagccaagcgtaaagaaaggcattcttcctgagattttggat
gagcttttggccgcccgaaagcgagcgaaggctgatttgaagaaagccacggatccgatc
atgaaggctgttcttgacggacggcagcttgcgctcaaagtcagtgcgaactccgtttat
ggcttcacgggagcgcaagtgggtaaactgccttgtctggaaatctcttccagcgtcaca
gcgttcggacgtgaaatgattgaacttacaaaagcaaaagtggaggcacattataccgtt
gccaatggatacaagcatgacagcgtcgttgtgtatggtgatacggactccgtaatgatc
aagttcggtgaaaatcgtgaaagatggatgattgacgagactatgaagcttgccctgtcc
gccgcagattttgtcaatacatcttttgtaaaaccgattaagctagaattcgaaaaggtt
tactatccgtatttgttgatgaacaagaagcgatatgctgctcttctttggacgaatccg
gacaagttcgataagatggattgcaaaggaattgaaactgtgaggagagacaattgtggt
cttgtccgaaccatggtggacacctgcttaaaaacaattttgatgcaacgagatccgaat
gcagctgcggaatacgtgaagggtgtgattcgtgatcttctgatgaacaaagttgatatc
agcgagttgatcatcaccaaggctctacacaagtctgaagaagactcaaagagcgcgcaa
gcacacgtcgtcttagctgccaggatgaaggagcgagatccaaacactgctcctgtgctc
ggcgaccgtgtgccctatgtaattatcaaaggtccgaaaggagcgaaggcctttgaaaag
gctgaagatcctatctttgtactggagaacaatttgcctatagatgtgcagcattaccta
gaccaccagctttcacagcccatcctgcgtttattcgaacctatcctggataaacctcag
tctttgctttctggagaccacactcgccagatatctttgtccacccctacgaccggtggc
ttgatgaaattcgtcaaagccaccaagacctgcttgggctgccgcactccgttgaaagat
gagcgagctaccgtttgtgaacactgcaagcccaaagaggtgttgttcaaggttgccgta
cgcagcattgacaacttgaaccacatgcaaactcagttcgccaagttatggactcagtgc
cagcggtgtcagggatctctacacatggaagtcatctgtacgtcaagggattgccccatc
ttctaccgaaggcgaaaggcgcacaaagacttgatcgaggctcagaagacggccgaaaga
ttctctctcagctggtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (81)   
   KEGG ORTHOLOGY (1)   
   RefGene (76)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (99)   

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