KEGG   Guillardia theta: GUITHDRAFT_157593
Entry
GUITHDRAFT_157593 CDS       T02925                                 
Name
(RefSeq) transcription initiation factor TFIID, subunit TAF6
  KO
K03131  transcription initiation factor TFIID subunit 6
Organism
gtt  Guillardia theta
Pathway
gtt03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gtt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    GUITHDRAFT_157593
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gtt03021]
    GUITHDRAFT_157593
   03036 Chromosome and associated proteins [BR:gtt03036]
    GUITHDRAFT_157593
Transcription machinery [BR:gtt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     GUITHDRAFT_157593
   Coactivators
    SAGA/TFTC/STAGA complex
     GUITHDRAFT_157593
Chromosome and associated proteins [BR:gtt03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     GUITHDRAFT_157593
    STAGA complex
     GUITHDRAFT_157593
    TFTC complex
     GUITHDRAFT_157593
    SAGA complex
     GUITHDRAFT_157593
    SLIK complex
     GUITHDRAFT_157593
SSDB
Motif
Pfam: TAF6_C TAF Histone TFIID-31kDa TAF4
Other DBs
NCBI-GeneID: 17304287
NCBI-ProteinID: XP_005834485
JGI: Guith1_157593
UniProt: L1JHD2
Position
Unknown
AA seq 390 aa
MSIIREDLVQEAAAAAGVKNVGEKVAASLAADAEYRLREIIQDALNFKRHSRRRKLTPAD
INNALRVRNVEPLYGFTFPEPIVYTTKQGEGGGSQIIIEEKELEFDELLSAPLPKAPVEV
TLRAHWLAIDGVQPLIPENPIPENLDVAAAGKKRKVKDSETSEKDPMVQDVLSQELQLYY
ENVTSAVIQGSPHILSAALSSLRKDPGLQALLPYFAQFITDEVKRSLKDLPILNALLSMT
LAILSNAQLHVEPRLHELMPAVMTCMVGKQLCKSSLDPHWNLRDRAAKLLNFIVDRYAAP
YSTLQQRITNTLLHAFLEPTKPLTTHYGAIAGLAALGPQTMNQLIVPNAPAYASLLQKYT
FDNHIKRFEAIRVRGALLDAVGKSFTHTRV
NT seq 1173 nt   +upstreamnt  +downstreamnt
atgagcatcatccgcgaggatttggtgcaggaggcggcggcggcagcaggggtgaagaat
gtcggggagaaggtcgcggcgtcgctcgctgctgatgctgagtaccgactaagggagatc
attcaagacgccctcaacttcaagcgccactctaggaggaggaagctcaccccggcggac
atcaacaacgcgcttcgggttcgcaatgtcgagcccttatacggcttcacctttccggag
cccatcgtgtacacaaccaagcaaggagaaggaggagggtctcagattatcatcgaggag
aaagagctggagttcgacgagctcctgtctgctccattgcccaaagcaccagttgaagtt
actctcagagcccactggctcgccattgatggcgtgcagccgttgattccagagaacccg
atccctgagaacttggacgtggcagcagctggcaagaagaggaaggtgaaagatagcgag
accagtgagaaggatcccatggtgcaagacgtactttcccaggagcttcagctttattat
gagaacgtcacttctgctgtcattcaaggctctccgcacatcctgagcgcagccttgtca
agcttaaggaaggatcctggtctgcaggctcttcttccctactttgctcagttcatcacg
gacgaggtcaagaggtctctcaaggaccttccaatcctcaacgcactcttgtctatgacg
ctcgccatcctctcaaacgcgcagctgcatgtcgaaccaaggctccacgagctcatgccg
gccgtcatgacctgcatggttggcaagcagctttgcaagtccagcctggatcctcactgg
aaccttcgggatcgtgcggcaaaactcttgaatttcatcgtcgacaggtacgccgcacct
tactcgacgttgcagcagcgcatcaccaacactcttctacatgcgttcctggagcccacc
aagcctctgaccactcactacggcgctattgcagggttggcagcgctggggccacagact
atgaatcagctaatcgtgccgaacgctccagcctacgcgtcgttgctacaaaagtacacg
tttgacaaccatatcaaacgattcgaggcgattcgagtccgtggagctttgttagatgct
gtcgggaaatctttcactcacacacgagtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (37)   

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