KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0020
Entry
HMPREF0424_0020   CDS       T01146                                 
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
  KO
K01867  tryptophanyl-tRNA synthetase [EC:6.1.1.2]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:gva00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HMPREF0424_0020 (trpS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:gva01007]
    HMPREF0424_0020 (trpS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gva03016]
    HMPREF0424_0020 (trpS)
Enzymes [BR:gva01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.2  tryptophan---tRNA ligase
     HMPREF0424_0020 (trpS)
Amino acid related enzymes [BR:gva01007]
 Aminoacyl-tRNA synthetase
  Class I (G)
   HMPREF0424_0020 (trpS)
Transfer RNA biogenesis [BR:gva03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Other AARSs
    HMPREF0424_0020 (trpS)
 Prokaryotic type
    HMPREF0424_0020 (trpS)
SSDB
Motif
Pfam: tRNA-synt_1b CHASE3
Other DBs
NCBI-ProteinID: ADB14269
Position
complement(23867..24958)
AA seq 363 aa
MPEEAQVTAAGNEMSASFLAARKRSDATLEKLQASPSSFTMLTGDRPTGRLHLGHYFGSI
RERVAMQQRGVKTNIIIADYQVITDRDTTEHIEDNVLNLVLDYMAAGIDPEKTMIFTHSA
VPAANQLMLPFLSLVTEAELHRNPTVKSEMESSGHALTGLLLTYPVHQACDILFCKANVV
PIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAILSDAPEIPGLDGRKMSKSYGNSI
MLGATAEETAKLIKKSPTDSERMITFDPVTRPQVSALLTTAGLVTGRDPKEIAEEIGNAG
AGALKAYVIENVNNFLAPHRERRAELAKDMDTVRDILHDGNKRANAIAEETLSQVRDAMG
MKY
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgccggaagaagcacaggttacagctgctggtaatgagatgagcgcaagcttccttgca
gcgcgtaaacgttcagatgcaacgcttgaaaagttacaagctagcccttcgtcttttact
atgcttactggagatcgcccaactggtcgtttgcatttaggacattattttggatctatt
cgtgagcgtgttgcaatgcagcagcgcggagtaaaaaccaatattattattgcagattat
caagtaattactgatcgtgacaccactgagcatattgaagataatgttttgaatttagtg
ctggattatatggctgccggaattgatcctgaaaaaacaatgatatttactcattccgca
gttcctgcagcaaatcagcttatgttgcctttcctttcgcttgttacagaagcagaatta
cacaggaatcctactgtaaagtcggaaatggaatcatctggacatgctttaaccggattg
cttcttacgtacccagtgcaccaagcttgcgatattttgttctgcaaagctaatgttgtg
ccgattggtaaagataatttgccgcacgttgaaatcactcgtacaattgcgcgtcgtttt
aatgagagatacgcaaaaaagaatccagtgttcccagagccagcagcaattttgtctgat
gctcctgaaattccaggattggacggacgaaagatgagcaaatcttacggtaactcgatt
atgctcggggctactgccgaagaaactgccaaattaattaagaagagtccaactgattct
gagaggatgattacttttgatccagtaactcgtccgcaagtttctgcacttcttactact
gcaggtttagttacaggtagggatcctaaagagattgctgaagaaattggtaacgctggt
gctggcgcattgaaagcttacgtaattgaaaatgtaaataatttcttggcacctcaccgt
gagcgtcgtgcagaacttgcaaaagatatggatactgttcgagacattttgcatgatggc
aataagcgtgcaaatgctattgcagaagaaacgctttcccaagtgcgagatgctatggga
atgaagtattaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (24)   

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