KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0103
Entry
HMPREF0424_0103   CDS       T01146                                 
Name
(GenBank) Thiol-activated cytolysin
  KO
K11031  thiol-activated cytolysin
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gva00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HMPREF0424_0103
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02042 Bacterial toxins [BR:gva02042]
    HMPREF0424_0103
Bacterial toxins [BR:gva02042]
 Type II toxins: Membrane damaging toxins
  Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
   HMPREF0424_0103
SSDB
Motif
Pfam: Thiol_cytolysin Thiol_cytolys_C
Other DBs
NCBI-ProteinID: ADB14641
Position
complement(121784..123334)
AA seq 516 aa
MKSTKFYRNAAMLLLAGATIIPQCLAVPAMADSSAKPSAPAASCAASKDSLNNYLWDLHY
DKTNILARHGETINNKFSSDSFNNNGEFVVVEHQKKNITNTTSNLSVTSANNDRVYPGAL
FRADQNLMDNMPSLISANRAPLTLSIDLPGFHGGESAVTVQHPTKSSVTSAVNGLVSKWN
AQYAASHHVAARMQYDSASAQSMNQLKAKFGADFAKIGVPLKIDFDAVHKGEKQTQIVNF
KQTYYTVSVDAPDSPADFFAPCTTPESLKNRGVDSKRPPVYVSNVAYGRSMYVKFDTTSK
STDFQAAVEAAIKGVDIKPNTEFHRILQNTSVTAVILGGSANGAAKVITGNIDTLKALIQ
EGANLSTSSPAVPIAYTTSFVKDNEVATLQSNSDYVETKVSAYRDGYLTLDHRGAYVARY
YVYWDEYGTDIDGTPYVRSRAWEGNGKYRTAHFSTTIQFKGNVRNLRIKLEEKTGLVWEP
WRTVYNRTDLPLVRQRTIKNWGTTLWPRVAETVKND
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgaagagcacaaagttctaccgtaatgcagcaatgttgttgctcgcgggcgcgactatt
attccacaatgcttagcagttccagcaatggcagattcttctgcaaagccttctgcacca
gctgcatcttgtgcagctagcaaggactcgctgaacaactacttgtgggatttgcattac
gataaaacgaatattctcgcacgtcacggcgaaacaattaacaataaattctctagcgat
agcttcaacaataacggtgaattcgttgttgttgagcaccagaagaagaacatcacaaat
acaacatcaaacttgtcggtaacttcggccaacaatgatcgcgtatatccgggtgcatta
ttccgcgctgaccagaatttgatggataacatgccaagcttgatttcagcaaatcgtgct
ccattaactttgagtattgatttgccaggcttccatggcggcgagagtgctgtaaccgtg
caacatccaaccaagagctccgttacttcagcagttaacggcttagtttctaagtggaat
gcacaatatgcagcaagccatcatgtggcagctcgtatgcagtatgattccgcaagcgca
cagagcatgaaccagctcaaagctaagtttggtgctgattttgcaaagattggcgtaccg
ctgaagattgatttcgatgcagtacacaagggtgagaagcagactcaaattgtgaacttc
aagcaaacttactacacagtaagcgttgacgctccagatagcccagcagatttctttgct
ccatgcactacgccagaaagcttgaagaaccgtggcgttgacagcaaacgcccaccagtt
tacgtatcaaacgtagcttatggtcgctcaatgtacgtaaagttcgataccaccagcaag
agcactgatttccaggctgcagtagaagcagcaattaagggcgtagacatcaagccaaac
accgaattccatcgcattctccagaatacctctgttactgcagtgattctcggcggcagc
gctaacggtgcagcaaaggttattaccggcaatatcgatacgctaaaggctttgattcag
gaaggtgcaaatttgagcacctctagcccagctgttccaatcgcttacactacttccttc
gtaaaagataacgaagtagcaactctccagagcaacagcgattatgttgagactaaggtt
tctgcttaccgtgacggttatttgaccttggatcatcgtggggcttatgtagctcgctac
tacgtctactgggatgagtacggcactgatatcgacggaactccatacgtacgttctcgc
gcttgggaaggaaacggcaagtatcgtaccgctcacttcagcacaacgattcagttcaag
ggcaatgtgcgcaatcttcgcattaagttggaagaaaagaccggcttagtatgggaacca
tggcgcacagtgtacaaccgtactgatttgccgttggttcgccagcgcacaatcaagaac
tggggtacaactttatggcctcgcgtcgctgaaactgtaaagaatgactga

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