KEGG   Gardnerella vaginalis 409-05: HMPREF0424_0386
Entry
HMPREF0424_0386   CDS       T01146                                 
Symbol
sufS
Name
(GenBank) cysteine desulfurase, SufS subfamily
  KO
K11717  cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Organism
gva  Gardnerella vaginalis 409-05
Pathway
gva00450  Selenocompound metabolism
gva01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gva00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    HMPREF0424_0386 (sufS)
Enzymes [BR:gva01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     HMPREF0424_0386 (sufS)
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.16  selenocysteine lyase
     HMPREF0424_0386 (sufS)
SSDB
Motif
Pfam: Aminotran_5 Cys_Met_Meta_PP Aminotran_1_2 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: ADB14579
Position
415982..417340
AA seq 452 aa
MTTVTTENIMREFSDLRSQFPILSRTVHGTSLHDTVHGKPLIYLDSAATSQKPQVVIDAE
KEFYETINAGVHRGAHELAALSTVAFEEARAKVARLVGACADAGSEEIIVTPGATGAFNL
FATAIGNASAKARICKKDSDDSADFRQNFVLREGDVIVVSRADHHSVLLPFQELALRTGA
ELRWIDVTEDGRVRTDADYLRTIIDERTKIVAVTHISNVTGAITDVSSICKRAHEVGAIF
VLDACQSVPHIPVDFHTLNVDFAAFSAHKMYGPTGVGFLYGRRELLNALPPANFGGSMVE
LAWLNKPAQYMDAPYRFEAGTQPVAQMVAAGVAADWLRAVGMNKVAEHEREIAAELLKLQ
DVPGVRILGPADLENRIGTVAFEVEGVHPHDVGQFLDAQGIAIRVGHHCAQPIHRHFGVY
ASNRASVGVYNTVDEARAFVEAVSHVRAYFGA
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgactacagtgactacagaaaatattatgcgagaatttagtgatttgcgctcgcagttt
ccgattttaagtcgcacggttcacggcacttcgcttcacgatactgtgcacggaaaaccc
ttgatttacttggattctgcagctacttcgcaaaagccgcaagttgtaatcgacgccgaa
aaagagttttacgaaacaattaacgctggtgtgcacaggggagcgcacgagttggcggca
ctttccacggttgcgttcgaagaagcgcgtgcgaaagttgcgcgtctcgttggagcttgc
gcggatgctggcagcgaggaaattattgttactccgggcgcgaccggcgcgtttaatctt
ttcgcaactgctattggtaacgctagtgcgaaggcgagaatttgcaaaaaagacagcgat
gattctgctgatttccgccaaaattttgtgcttcgagaaggcgatgtaatagtcgtatct
cgcgcagatcatcactctgttttgctaccatttcaagagctggctcttcgcactggagcg
gagcttcgttggattgacgtaacagaggacggccgcgtgcgcacggacgcggattatttg
cgaacaattattgacgagcgcacgaaaatcgttgcagttacgcatattagcaacgttact
ggcgcgattacggatgtttcgtcgatttgcaagcgcgctcacgaagttggtgcgattttt
gtgctcgacgcatgccagtcagtgcctcatattccggttgattttcacactttaaacgtt
gattttgcggcatttagtgcgcataaaatgtatggtcctacaggagttggattcttgtat
ggtcgccgcgagcttttgaacgcgcttccacctgccaattttggcggctcaatggtagag
cttgcgtggcttaacaagccggcgcaatacatggatgcgccttaccgttttgaggctgga
actcagccggttgcgcaaatggttgcggctggcgttgcagcggattggttgcgcgcggtg
ggcatgaataaagttgcagagcatgagcgggaaattgctgcagaattgctaaaattgcaa
gacgttccgggagttcgcattttggggccggctgatttagagaatcgaattggcacggtt
gcttttgaagttgaaggtgtgcatccgcacgatgttggacagtttttggacgcgcagggc
attgcgattcgcgtcggacaccattgtgctcagccgattcaccgtcattttggcgtgtat
gcttcgaatcgcgcttctgttggcgtttacaacacagttgacgaggctcgcgcgtttgtt
gaagcagtctcacacgttcgcgcctactttggcgcataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (28)   

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