KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_0380
Entry
HMPREF9231_0380   CDS       T01939                                 
Name
(GenBank) single-strand binding family protein
  KO
K03111  single-strand DNA-binding protein
Organism
gvh  Gardnerella vaginalis HMP9231
Pathway
gvh03030  DNA replication
gvh03430  Mismatch repair
gvh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HMPREF9231_0380
   03430 Mismatch repair
    HMPREF9231_0380
   03440 Homologous recombination
    HMPREF9231_0380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gvh03032]
    HMPREF9231_0380
   03400 DNA repair and recombination proteins [BR:gvh03400]
    HMPREF9231_0380
   03029 Mitochondrial biogenesis [BR:gvh03029]
    HMPREF9231_0380
DNA replication proteins [BR:gvh03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HMPREF9231_0380
DNA repair and recombination proteins [BR:gvh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     HMPREF9231_0380
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    HMPREF9231_0380
Mitochondrial biogenesis [BR:gvh03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial DNA replication factors
   Other Mitochondrial DNA replication factors
    HMPREF9231_0380
SSDB
Motif
Pfam: SSB tRNA_anti-codon tRNA_anti_2
Other DBs
NCBI-ProteinID: AEF31319
Position
474481..475122
AA seq 213 aa
MAGETVITVIGNLAKEPETATSSNGSVRTSFTIVSNSSTFDRRTNSYINGTPLSLRCVAW
GDLAEHCAQTLTKGMRVIVQGRLRANNYVDKNSNEKRYSIDLMIDEIGPSLRFATAQVNR
LSSKGGFAGNNNGFNQGAGAGAGMNAGGYTGGYAGGANYANSAAAGAGMNAQNGANQGVN
VEDPWSASAPSNGGFATFGASSDFGGSDEEPEF
NT seq 642 nt   +upstreamnt  +downstreamnt
atggctggagaaactgttataacggtgattggaaatttggctaaagagccagaaactgcc
accagttctaacggcagtgttagaacttctttcacaattgtgtctaattcttcgactttt
gacagaagaacaaatagctacattaatggcacaccattatcgcttagatgtgttgcatgg
ggagacttagctgagcattgcgcgcaaacgcttacaaagggaatgcgtgttattgttcag
ggcagattgcgtgcaaacaactacgttgataaaaacagcaacgaaaagcgatacagcatc
gatttgatgattgatgaaattgggccatccctgcgatttgctactgctcaagttaatcgt
ttgagctctaaaggcggttttgctgggaacaataatggattcaatcagggcgctggtgct
ggagctggtatgaatgctggtggatacactggcggttatgctggcggcgcgaattatgcg
aatagtgcggctgctggtgctggaatgaatgcgcaaaatggcgctaatcagggcgtaaac
gttgaagacccgtggagtgcttctgctccatcaaatggcggatttgcaacgtttggagct
agctccgattttggtggatcagacgaagagccagagttctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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