KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_0590
Entry
HMPREF9231_0590   CDS       T01939                                 
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
gvh  Gardnerella vaginalis HMP9231
Pathway
gvh03010  Ribosome
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    HMPREF9231_0590 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:gvh03011]
    HMPREF9231_0590 (rpsA)
Ribosome [BR:gvh03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    HMPREF9231_0590 (rpsA)
  Bacteria
    HMPREF9231_0590 (rpsA)
SSDB
Motif
Pfam: S1 Spt6_S1 S1_2 RNase_II_C_S1 Caudal_act
Other DBs
NCBI-ProteinID: AEF30873
Position
696029..697531
AA seq 500 aa
MAENNNEVAKVAINDIGTEEDFIKAVDSTIKNFDDGDLVEGTVVKIDHDEVLLDIGYKTE
GVIPSRELSIKKDVDPDDVVEVGDTIEALVVTKEDKEGRLILSKKRAQYERAWGDIEKIK
DADGIVEGTVIEAVKGGLIVDIGLRGFLPASLVEMRRVRDLSPYIGQKIKAKILELDKNR
NNVVLSRRQFLEETQSEVRETFLSQLKKGQIREGVVSSIVNFGAFVDLGGVDGLIHVSEL
SWKHIDHPSEVVKVGDKVTVEVLDVDLDRERISLSLKATQEDPWQRFARTHVPGQVVKGK
VTKIVQFGVFISVEDGIEGLVHISELANRHVENPETVVKGGEEVFVKVIDVDLDRRRISL
SLKQANEAVDPNSEDFDPALYGMPAEYDEEGNYKYPEGFDPNTNEWIAGYEQQREEWEAQ
YAAAHELWEQHKVFAAKELAAAAESAAADGQNEEAEKKPAKEEKKEEVASNYSSEAASEG
ALADSDQLAALREQLLSEKK
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggcagagaataataacgaagtcgccaaggttgcgattaatgatattggcaccgaagaa
gacttcatcaaggcagtcgattcaaccatcaagaattttgacgatggtgatttagttgaa
ggtacagtcgtaaagattgatcacgacgaagtattgttggacatcggctacaaaactgaa
ggtgtaatcccttcccgtgaactttccatcaagaaagacgttgatccagatgatgttgtt
gaagttggcgacaccatcgaagcccttgttgtaactaaggaagacaaggaaggacgtctt
attctctccaagaagcgtgcacagtatgagcgtgcttggggtgatattgagaagatcaag
gatgcagacggcattgttgaaggtaccgttattgaggctgttaagggcggcttgattgta
gacatcggtttgcgcggcttcttgccagcttccctcgttgaaatgcgtcgcgttcgcgat
ctttccccatacattggtcagaagattaaggctaagattcttgagcttgataagaatcgc
aacaatgttgtactttctcgtcgtcaattcctcgaggaaacccagtccgaagttcgcgag
accttcctttcgcagcttaagaagggtcagattcgtgaaggcgttgtgtcttccatcgtg
aacttcggcgcattcgttgatctcggcggtgttgacggtctcattcacgtttccgagctt
tcttggaagcatatcgatcacccatccgaggttgttaaggttggcgataaggtcactgtt
gaggttctcgacgttgatctcgatcgcgaacgcatctccctctcccttaaggcaactcag
gaagatccatggcagcgcttcgctcgtacccatgttcctggacaggttgttaagggtaag
gtcaccaagattgttcagttcggtgtgttcatctccgttgaagacggcatcgaaggcttg
gttcacatttccgagcttgctaaccgtcatgtagagaacccagaaactgttgttaagggt
ggcgaagaagtattcgttaaggttattgacgtagatctcgatcgtcgtcgtatctcgctc
tccttgaagcaggctaacgaggctgttgatccaaattctgaagatttcgatccagctctc
tacggcatgccagctgagtatgacgaagaaggaaactacaagtacccagaaggcttcgat
ccaaacactaacgagtggattgctggttacgagcagcagcgcgaagagtgggaagcacag
tatgcagcagctcacgaattgtgggagcagcacaaggtgtttgccgctaaggaactcgca
gctgcagcagaatccgcagccgctgatggtcagaacgaagaagctgaaaagaagccagct
aaggaagaaaagaaggaagaagttgcttccaactattcttctgaagcagctagcgaaggt
gctttagctgattccgatcagctcgcagctttgcgcgaacagcttttgagcgaaaagaag
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system