KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_0988
Entry
HMPREF9231_0988   CDS       T01939                                 
Name
(GenBank) FAD binding domain protein
  KO
K00239  succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
Organism
gvh  Gardnerella vaginalis HMP9231
Pathway
gvh00190  Oxidative phosphorylation
gvh00650  Butanoate metabolism
gvh01100  Metabolic pathways
gvh01110  Biosynthesis of secondary metabolites
gvh01120  Microbial metabolism in diverse environments
gvh01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    HMPREF9231_0988
   00650 Butanoate metabolism
    HMPREF9231_0988
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    HMPREF9231_0988
Enzymes [BR:gvh01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     HMPREF9231_0988
SSDB
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 DAO Thi4 HI0933_like GIDA Lycopene_cycl
Other DBs
NCBI-ProteinID: AEF32015
Position
1188327..1190306
AA seq 659 aa
MSQQKENTTTVKEKTVQIQVEQSSYDVVIIGAGAAGLSAALGLVKSEEYKTLKSQGKQPK
ILVICKLQALRSHTGSAEGGIAASLGNIEKDFWQWHYYDTVHGGDWLSDQDAAKMLAKEA
RDTVIELEHFGVAFSRTEDGHINQRFFGGHTADFGQQPIRRAAYAADRIGHQILYSLWQK
CIEENIKIEEDIYVTDLAINHKSNSVEGIIALNEKSGKVEKICARNVLIATGGAGRLFST
TSNSWDLTGDGMSLALNAGLQLEDIEFIQFHPTGLAHTGILLSEAARGEGGVLRNCKNEA
FMKNYDDTHADLAPRDVVSRSIVSEIDALRGVEDTTSSIDRKDCVWLDMTRIEKQHMLSA
LPQVVETIEKYAHLDPSKDLIPIRPTAHYTMGGIPISLNGQVYKLVNNKKQRIIGLYAAG
ECACSGVHGANRLGGNSLLDACLFGKLSGKSIAKELKEQSQEKSQEKHEEHIVDTSKNVY
DSTPNTFENLDKLSENRVQEIIGLIQNTSTSSNTTNPYNLLEKLENIMENAAAVRCSENT
LKDALQKIDTIIIPQAKILVLHSQNLVFNQELIAIWELQNMITLAKSVLQASLARHESRG
AFTRLDYPKRNNNQNPQHSIVDSSGEVQNIPVIIVDFDPNKPINHQNKDEINKIMTKID
NT seq 1980 nt   +upstreamnt  +downstreamnt
ttgagtcagcaaaaagaaaatactactacagttaaagaaaaaactgtgcaaatacaagta
gagcaatcatcatacgatgttgtgattatcggcgcaggagcagcaggactttctgcagca
ctgggattagtgaaatctgaagaatataaaacgctaaaatctcaaggaaaacagcctaaa
atattagtgatttgcaagcttcaagcgttaaggtctcatacaggttctgccgaaggtgga
atcgcagcatcattaggaaacatagaaaaagatttctggcaatggcactattacgacacc
gttcacggtggagactggttaagcgatcaagacgcagcaaaaatgctagcaaaagaagct
agagatacagttattgaactagaacactttggagttgccttttctagaacagaagatggt
catattaatcaaagattttttggtgggcatactgccgacttcggtcagcagccaattaga
cgagctgcgtacgctgcagacagaattggacaccaaattctatacagcctatggcaaaaa
tgcatagaggaaaatattaaaatcgaagaagatatttatgtaacagaccttgctataaac
cacaaatctaatagcgtagagggcataatcgcgctaaacgaaaaaagtggaaaagtagaa
aaaatatgtgcaagaaatgttcttatagcaactggtggagctggaagactattttcaaca
acatctaattcctgggatttaactggggacggaatgtctttagcactaaacgcaggattg
caactagaagacatagagttcatacaattccatccgactggtctagctcatactggaata
ttgctttcggaagcagctcgaggagaaggcggagttcttaggaattgcaagaatgaagca
tttatgaaaaactacgacgacacgcatgcggatttagctccaagagatgtagtaagcagg
tcgattgtatcagaaatagatgctttaagaggcgttgaagatactactagcagcattgat
agaaaagattgcgtatggctagatatgactcgtatagaaaagcaacatatgctgagtgct
cttccacaggttgtagaaactattgaaaaatacgctcatcttgatccatcaaaagatctt
atacctattagacctacagcgcattacacgatggggggaatacccatatcgcttaacggg
caagtttataaactggttaataataaaaaacagagaataataggattatatgccgcagga
gaatgcgcatgctcgggagtacatggagccaatcgccttggcggaaactctcttcttgat
gcatgcctgttcggaaaactatctggtaagtctattgcaaaagaattaaaagaacaaagt
caggaaaaaagtcaggaaaaacacgaagagcatatagtagatacatcaaaaaatgtgtac
gatagcactcctaatacttttgaaaatctagacaaattatcagaaaatcgtgtacaagag
ataatcggtcttattcaaaatacaagcacatctagcaacacaacaaacccatataatcta
ctagaaaaactagaaaatattatggaaaatgctgcagcggttagatgcagcgaaaatacc
cttaaagatgctttgcaaaaaatcgatacgattattattccgcaagctaaaattcttgtt
ttacattcacaaaatcttgtttttaatcaagagctaattgctatttgggaattacaaaac
atgattacgcttgcaaaatcggttctgcaagcatcacttgcaagacatgaatctcgtgga
gcattcacaagattggactatccaaaacgtaataacaatcaaaatccacaacattctata
gtggattcaagcggcgaagtgcaaaatattccagtaataattgtcgattttgacccaaac
aagcctattaatcatcaaaataaggatgaaattaacaaaattatgacaaaaatagattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (6)   
   KEGG MODULE (6)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system