KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_0995
Entry
HMPREF9231_0995   CDS       T01939                                 
Name
(GenBank) cobalt ABC transporter, ATP-binding protein
  KO
K01552  energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
gvh  Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:gvh02000]
    HMPREF9231_0995
Transporters [BR:gvh02000]
 ABC transporters, prokaryotic type
  Metallic cation, iron-siderophore and vitamin B12 transporters
   Energy-coupling factor transporter
    HMPREF9231_0995
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_16 AAA_22 AAA_15 AAA_23 AAA_29 Mg_chelatase AAA_13 NB-ARC AAA nSTAND3 AAA_25 TsaE AAA_18 Zeta_toxin AAA_24 DO-GTPase2 TniB AAA_28 PhoH nSTAND1
Other DBs
NCBI-ProteinID: AEF31761
Position
complement(1197641..1199458)
AA seq 605 aa
MSLLELREVSFKYLNHNKDDSLDSAKAQDSTFALNNISLSIEAGEFVGIIGPSGSGKTTL
ASIFSGAIPHHYSGELSGIVKIAGQETKNLALTNIACLIGSVIQDIDAQMVAANVEDEIL
FGLENFGVAHNEIPNRIDEALQIVGISDLRNRDLDTLSGGQKQKVAIAAILALKPKVMVL
DEPTCALDPVSSKMIFSILKDLNKNFGITVVVIEQKVALLSEYCKRLVVLSNGTLSLDLP
VGQALKNMDLLYSIGINYPRTTHLVNDLQRESVCSKSDLPVSVEDTVNTIVNTINSGNSL
VSHDDSHSECDEDKCAAAFDFSNASQNLAQNSSPCLSLQNVSFSYPSGVSALENVSFDAY
PGELVTLVGRNGAGKTTVTKIINGLLKPSSGSIFIDGKNTSNMKISQIAHYVSTLFQNPD
RQLCKDTILEEVAFSCILLGESVKEANDHAMQVIEKLNLDPNASPFMLSRGQRQMVALAA
TVVTKPKILVLDEPTCGLDYMECLRIMQVVEDLRDHGCCVIMVCHDMEVVLDFATRLIVV
NDGHILEDGSISHVFENKSICDEAALCAPLLCAVSQGLAKNGFAKCKGLYKRDMLVNALK
KSCNL
NT seq 1818 nt   +upstreamnt  +downstreamnt
gtgtctttgcttgagcttagggaagtatcttttaaatatttgaatcataataaggatgat
tctttagactctgcaaaggcacaagattccacttttgccttgaacaatataagccttagt
attgaagctggcgaatttgttggaattattggaccatctggatctggtaaaacaactctt
gcctctattttctctggtgctattcctcatcattattctggagaactttctggaatcgtt
aagattgcaggtcaagaaactaaaaatcttgctttaactaatatagcctgcttaattgga
tcagttatccaagatattgatgcgcaaatggtggctgcaaacgtagaagatgagattctt
tttggtctagaaaactttggtgttgcacacaatgaaataccgaatcgaatcgatgaagct
ttacaaattgttggcattagtgatttgcgcaaccgcgatttagacactctttctggaggt
caaaagcagaaagttgcgattgctgctattcttgcgctaaaacctaaagttatggtgtta
gatgagcctacgtgcgctttagaccctgtttcttctaaaatgattttttcgattcttaaa
gatttgaataagaattttggaataacggttgttgtaattgagcagaaagtggcgctttta
agcgagtattgcaagcgtttggttgtgctttctaatggcactttatcactggatttgcct
gttggacaagcgctaaaaaatatggatttgctttattctattggaataaattatccgcgc
actacgcatttggttaatgatttacagcgtgagagtgtttgctctaaaagcgatttgcct
gtgtctgtagaagatacagtaaatactattgttaatacgattaatagtggaaattcttta
gtttcacatgatgattcacatagtgaatgcgatgaagataaatgtgcggctgctttcgac
ttttccaatgcatcgcaaaacttagcacaaaattcttcaccatgtctttctttgcaaaat
gttagtttttcatatccgagtggtgttagtgctttagaaaacgtgtcttttgacgcttat
cctggggagcttgtaactcttgttggaagaaatggtgctggaaaaacaactgttactaag
ataataaacggtttgcttaagccaagtagtggaagtatttttattgatggcaaaaatact
agcaacatgaaaataagccaaattgctcactatgtttcaactcttttccagaatccagat
cgtcagctttgtaaagatactattttagaagaagtagcgtttagttgtattcttttaggt
gagtctgttaaagaagctaatgatcatgctatgcaagtgattgaaaagcttaatttagat
cctaatgctagcccttttatgctttctagaggtcagcgtcagatggtggcattggctgca
actgttgtaactaaacctaagattcttgtattagatgagcctacttgcggactggattac
atggaatgcttgagaatcatgcaagttgtagaagaccttagagaccatggttgttgcgta
ataatggtttgccacgatatggaagttgttcttgattttgcaacgcgtttaatcgtagta
aatgatggacatattcttgaagacggaagcataagccatgtgtttgagaataagagtatt
tgcgatgaagctgctttatgtgctcctcttttgtgcgctgtatctcagggcttagctaaa
aatggttttgctaagtgtaaaggattgtataagagagatatgttggttaatgctcttaaa
aagagttgcaatttgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (23)   
   Pfam (23)   
All databases (29)   

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