KEGG   Gardnerella vaginalis HMP9231: HMPREF9231_1276
Entry
HMPREF9231_1276   CDS       T01939                                 
Name
(GenBank) S-adenosylmethionine-dependent methyltransferase, YraL family
  KO
K07056  16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Organism
gvh  Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:gvh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gvh03009]
    HMPREF9231_1276
Enzymes [BR:gvh01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.198  16S rRNA (cytidine1402-2'-O)-methyltransferase
     HMPREF9231_1276
Ribosome biogenesis [BR:gvh03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    HMPREF9231_1276
SSDB
Motif
Pfam: TP_methylase DUF6230
Other DBs
NCBI-ProteinID: AEF31792
Position
complement(1553195..1554088)
AA seq 297 aa
MRNEEDNLGKVVLAATPIGNMGDASSRLINLLETADIVAAEDTRRLYDLANRLGVHVSGQ
VIAYHDHNEHNKADGLLDKVEQGNTVLVVSDAGMPTINDPGLAIVRRAIERDLPVTCAPG
PSAVLDALALSGLPTDRFCYEGFLPRKSGDRQQHLRSLLSERRTIVFYEAPHRIAESMED
LLAVFGADRKMALCRELTKDFEEIRRGTISQICKSVENDPPRGEIVLVIAGATDEEIKQQ
NIDLSVEQLAQMSYDLSQNEGLRIKDAITRIVSQNPLSDGSFANRKEVYAACLNIKS
NT seq 894 nt   +upstreamnt  +downstreamnt
atgcgtaatgaagaagataatttaggaaaagttgttcttgcagccactccgattggcaat
atgggagatgcttcatcgcgcttgattaatcttctagaaaccgcggatattgttgcagca
gaagacacgcgtagactttacgaccttgcaaatcgccttggcgtgcatgtttctgggcaa
gttattgcatatcatgatcacaatgagcacaacaaggcagatggcttgctggacaaggtt
gagcaaggcaataccgttcttgttgtttctgacgctggtatgcctacgattaacgaccca
gggcttgcgatcgttcgccgtgcaatagagcgcgatttgcctgttacttgcgctcctgga
ccgagtgccgtactagatgctctagcgctttctggcttgccaacagaccgcttctgttat
gagggttttttgccgcgtaaatctggagacagacagcagcatttgcgctcgcttctttca
gagcggcgaacaatcgttttttatgaggcgccgcacagaattgcggagtcaatggaagat
cttcttgcagtttttggcgcagatcgcaaaatggcgttatgtcgcgagcttacaaaggat
tttgaggaaataaggcgaggaacaatttctcaaatatgcaaaagcgtagaaaacgaccct
ccgcgcggagaaattgttcttgtgattgcgggagctaccgatgaagaaatcaagcagcaa
aacattgatttgagcgttgaacagcttgcgcaaatgtcttacgatctttcgcaaaacgag
ggtttgcgtattaaagatgctataacgcgtattgtttcacaaaatcctctttcagacggt
tcttttgcgaatcgtaaagaagtttatgctgcttgtttaaacatcaagtcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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