KEGG   Paenibacillus sp. Y412MC10: GYMC10_1105
Entry
GYMC10_1105       CDS       T01100                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
gym  Paenibacillus sp. Y412MC10
Pathway
gym03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gym00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GYMC10_1105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gym03019]
    GYMC10_1105
Enzymes [BR:gym01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     GYMC10_1105
Messenger RNA biogenesis [BR:gym03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GYMC10_1105
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 SUa-2TM
Other DBs
NCBI-ProteinID: ACX63395
UniProt: D3EGM7
Position
1306495..1308015
AA seq 506 aa
MTFENLNISPVILKALAKENYKAPTPIQAQAIPAVLAGRDLLGCAQTGTGKTAAFSVPMI
QLLNQQPPKPGMGRRIRALVLSPTRELALQISDNVKAYSQFTKLRSTAIVGGVSQKTQER
ALQQGADILIATPGRLLDLMNQKHVDLQHVEILVLDEADRMLDMGFIHDVKRIIAKMPSK
KQTLFFSATMPAEITQLVQTLLHNPVKVEITPVSSTAERIEQSVYLLETGNKQQQLNELM
KDPSIVSALVFTRTKRGADRVARGLNKVNITAQAIHGDKSQTSRQTALNNFKSGATRVLV
ATDIAARGIDIDELSHVINFNLPNIPETYVHRIGRTGRAGLSGTAISFCEVDEVPFLRDI
EKLIGKSIPEVKDHAFPMSGALRAAKVDPTPKSGSSKPGKGRSAASRPAKPKADTARKPK
ADAARNPKTGAPRQSRQDAGIKPKTDAARQSKTNSARKPMTEAVTNPYSEMARKLSSEAA
SKPNNGQARKRKSGGFNKGSRAGRPS
NT seq 1521 nt   +upstreamnt  +downstreamnt
atgacatttgaaaatttaaatatatcccctgtcattctcaaggctttggccaaggagaat
tacaaagcgccgacgcctatacaggctcaggcgatcccggctgtgctggccggcagagat
ttgctgggctgcgcccagaccggaacggggaagaccgccgctttttcggtgccgatgatc
cagctgttgaatcagcaaccccctaaaccgggcatggggcgccgcattcgcgcattggtg
ttgtcgccgacccgggagcttgccctgcaaatttcggataacgtcaaagcttacagccag
ttcaccaagctgcgttcgacggccattgttggcggcgtttcgcagaagacgcaggagcga
gcgcttcagcaaggagcggacatcctgattgcgaccccaggcaggctgctggacctcatg
aatcagaagcacgtcgatttgcagcatgtggagattttggtgctggatgaggccgaccgg
atgctggatatgggcttcatccatgacgtgaagcgaatcatcgccaaaatgccgagcaaa
aaacaaacgctgttcttctcggccacgatgcctgcggaaatcacccagcttgtccaaacc
ttgctgcacaatcccgtaaaagtcgagatcacgccggtctcctctacggccgaacggatc
gagcaatcggtgtacctgctggaaaccgggaataagcagcagcaattgaatgagctgatg
aaggacccttccatcgtgtcggcattggtctttacccgtacgaagcggggagctgaccgg
gttgcgcgcgggctgaacaaggtgaatattacggctcaggccattcacggcgacaaatcg
caaaccagccgccagacggcgctcaacaatttcaaaagcggggcgacccgcgtcctggtg
gcaacggatattgccgcgcggggaatcgacatcgacgagctgtcgcatgtcattaacttc
aacctcccgaacattccggaaacgtatgtgcaccggattgggcgcacggggcgcgcggga
ctgagcgggacggcgatatcgttttgcgaagtggacgaggttccttttcttcgggatatc
gagaagctaatcggaaagtccattccggaagtgaaggaccatgcctttccgatgtccggg
gcgttaagagccgccaaggtggacccgacgccaaaatccggctcgtccaagcccggcaaa
ggcaggtcagctgcatcgagacctgctaaaccgaaggcggatacggcccgcaaaccaaag
gccgacgcggcacgtaacccgaagacgggtgcaccccgccaatcaagacaagacgcggga
attaagccgaagacggacgccgcccgccaatccaagacgaactcggcgcgtaagcccatg
acggaagccgtcacgaatccatattcagagatggcacgcaagctgagttcggaagcagct
tcgaaacctaacaacggccaggcccggaaacgcaagtccggcggattcaacaagggaagc
agagccggcagaccttcataa

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