KEGG   Haloarcula sp. CBA1115: SG26_19980
Entry
SG26_19980        CDS       T03645                                 
Name
(GenBank) transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
hab  Haloarcula sp. CBA1115
Pathway
hab03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SG26_19980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hab03021]
    SG26_19980
Transcription machinery [BR:hab03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     SG26_19980
 Prokaryotic type
  Archaeal type
    TFB
     SG26_19980
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon OrfB_Zn_ribbon DZR FYVE zinc-ribbons_6 zf-ribbon_3
Other DBs
NCBI-ProteinID: AJF28030
UniProt: A0A0B5GPX9
Position
unnamed4:complement(37707..38606)
AA seq 299 aa
MSSQTVQTELFAAAQGCPECGGTLDSSGRETHCENCGLVTEQDQIDHGPEWRTYNREEQK
RTGAPRTATRHDRGLSTNIGSAESSDISPRRRRQLARQRRLHSRSKYSSKRDRNLAHGLG
EVRRIASALSESRSVKEQASTFFREAQDEDLLIGRSIEGGAAAAVYAACRCTGLVTMGTV
ADVARCSASHAWNCYRTFLMELELSIPVSLPVDWVARICSDLPLDVAPEVRQRALELAER
ATESAEVNGRPDGVAAGALYLASRESDIRLTQGTISEPLDLHPETIRQWFQQIEEHIVE
NT seq 900 nt   +upstreamnt  +downstreamnt
atgtcttcacaaactgtccagacagagctgtttgcagctgcacagggctgtcccgagtgc
ggcggcacgctcgatagcagcgggcgggaaacgcactgtgagaactgtggcctggtgacc
gaacaagaccagatcgaccacgggccggagtggcgaacgtacaatcgggaggaacagaag
cggacgggtgccccccgaacggccactcgccatgaccggggcctgtcgacgaacatcggc
tcggctgagagttcggacatttctccaagacggcgtcgacagcttgctcgccagcggcgg
ctccacagtcggtcgaagtactccagcaagcgcgaccggaaccttgctcacgggctcggt
gaagtccgacgcattgcgagtgcgttgtctgagagtcggtcggtcaaagagcaggcatcc
acgttcttccgggaggcgcaggacgaggacctgctaatcggacggtcgattgaaggcggt
gcagcggccgctgtgtatgctgcctgccgatgcaccgggctcgtgacgatgggtacagta
gctgacgttgctcggtgttctgcatcgcacgcttggaactgctaccggacgtttttgatg
gaactcgaactctcaattccagtatcgctcccggtggactgggtggcacggatttgctcg
gatctcccgcttgatgttgcgccggaggttcgacagcgggcactcgaactggcagagcgg
gcaaccgagtccgctgaggtcaacgggcgaccggatggggttgcagccggcgctctgtac
ctcgccagtcgggagtcagatatccgactcacacaggggacgatcagcgagccgttggat
ttgcacccagagacgatccgccagtggttccagcagatcgaggaacacatcgttgaatga

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