KEGG   Helicobacter acinonychis: Hac_0974
Entry
Hac_0974          CDS       T00371                                 
Symbol
recJ
Name
(GenBank) single-strand DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hac  Helicobacter acinonychis
Pathway
hac03410  Base excision repair
hac03430  Mismatch repair
hac03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Hac_0974 (recJ)
   03430 Mismatch repair
    Hac_0974 (recJ)
   03440 Homologous recombination
    Hac_0974 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hac03400]
    Hac_0974 (recJ)
DNA repair and recombination proteins [BR:hac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Hac_0974 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Hac_0974 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Hac_0974 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: CAJ99746
UniProt: Q17X80
Position
856371..857921
AA seq 516 aa
MKQKLEAQIKERVASIAYSEKGFPSPFLFKDLKKAALKIIEAMEKYTEILVVGDYDADGV
ISSTIMAKFFASLNYKHVHVAIPNRFMDGYGISKQFLEKYHAPLIITVDNGINAFEAARF
CKEKNYTLIITDHHCLQNNEVPDAYAVINPQQPDCHFIQKEVCGALVAFYLCYGIHQLLK
KEKSHSSELLCLVGVATIADMMPLTFFNRFLVSKALYFLQKEPLGAIGFLRQKEVFRKRS
LKASDISFNIAPLINSAGRMQDARVALDFLSTNNLQDCCFLYERLKACNNERKITQQQVF
EEAFKHALVGEKIIIALKDNWHEGVLGIVASKLVEATQKPSLVFTFKEGAYKGSGRSSQN
VDLIDALNGVSSLLLGYGGHRQACGLSVEKNNMVSLFETLENFDFKVLPFCEKEPPLILR
LKDIDKELLEIIEMGEPYGQENPEPLFQAQNLEVIEEKIIKESHQALRFKDEESVKDAIY
FNAERFLKVGEKVSVLFSVELDEYSNEPKMFVKSLL
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgaaacaaaagcttgaagctcaaattaaagagcgagtggcttctatcgcttatagtgaa
aaagggtttcctagcccctttttgtttaaagacttgaaaaaagccgcactcaaaatcata
gaagcgatggaaaaatatacagagattttagtcgtgggcgattatgacgctgatggcgtg
attagctccactatcatggcaaaattctttgcgagtttaaattataagcatgtccatgtt
gcgatccccaatcgttttatggatggctatgggatttctaaacaatttttagaaaaatac
catgcccctttgatcatcacggtggataatgggatcaatgcctttgaagccgcacgattt
tgcaaagaaaaaaactacacccttatcatcacggatcaccattgcttacaaaataatgaa
gtcccagacgcttatgctgtaatcaacccccagcaaccagattgtcattttatccaaaaa
gaagtgtgtggggcgttagtagcgttttatttgtgctatggtatccaccaacttttaaaa
aaagaaaaaagccattctagtgagttattgtgtttagtgggcgtggcgactatcgctgat
atgatgcctttgactttttttaaccgctttttggtttctaaagccttgtattttttacaa
aaagaacctttaggagcgatagggtttttgcgccaaaaagaagtttttagaaaacgctct
ttaaaagcaagcgatatttcttttaatattgcccccttaatcaactccgcagggcgcatg
caagatgctagagtggccctagattttttaagcacgaataatttgcaagattgttgtttt
ttgtatgaacgcttgaaagcatgcaataatgaacgaaaaataacccaacaacaggttttt
gaagaagcctttaagcatgcgttggttggggaaaaaatcatcatcgctcttaaggataat
tggcatgagggcgtgcttgggattgtggcttcaaaattagtggaagccactcaaaagcca
agcctagtttttacttttaaagaaggggcgtataaggggagtgggcgcagctctcaaaat
gttgatttgattgacgctttgaatggggtttcttctttattattgggctatggggggcat
agacaagcatgcggtttgagcgttgaaaaaaataatatggtctcactctttgaaacttta
gaaaattttgattttaaagtcttgcctttttgtgaaaaagaaccccctttgatattacgc
ttaaaagacattgacaaagagcttttagagattatagaaatgggcgaaccttatgggcaa
gaaaaccctgaacccttattccaagcacaaaatttagaagtcatagaagaaaaaatcatc
aaagaaagccatcaagcgttgcgttttaaggatgaagaaagcgtcaaagacgctatttat
tttaacgctgagcggtttttaaaagtgggcgaaaaggtgagcgtgctttttagcgtggaa
ttagatgagtattctaatgagcctaaaatgtttgttaaaagtttgttatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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