KEGG   Helicobacter acinonychis: Hac_1298
Entry
Hac_1298          CDS       T00371                                 
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hac  Helicobacter acinonychis
Pathway
hac03420  Nucleotide excision repair
hac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Hac_1298 (rep)
   03430 Mismatch repair
    Hac_1298 (rep)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hac03400]
    Hac_1298 (rep)
Enzymes [BR:hac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Hac_1298 (rep)
DNA repair and recombination proteins [BR:hac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Hac_1298 (rep)
   MMR (mismatch excision repair)
    Other MMR factors
     Hac_1298 (rep)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_11 Viral_helicase1 AAA_12 AAA_30 DUF1043 ResIII DEAD
Other DBs
NCBI-ProteinID: CAK00040
UniProt: Q17WD6
Position
1113695..1115713
AA seq 672 aa
MLETLQLNPEQLKAASALQGHNLIIASAGTGKTSTIVGRILHLLDNGIKPEEILLLTFTN
KASSEMIARVAKYSKLSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELRKLLESIVDTKN
AIDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSNKNPEHTPYATFYENILEEFENTKK
KHNYIDYNDLLLLFKKAMLETPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQ
SIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNKRLYPKNLEVV
KSGDFNKPTLLNYNDNITQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRAHNVPS
KRKGSASFFESKEVALALDICTLVFNPKDIMAAIHVLSYVNDIGSNTAKDIHEALMLLGN
GDLKLALTHPNQEAKIYTKKKEITSMGLFEEIFALENSSRFNGVIAKAFHSHPVLMHPKI
SLNGAKMLSDFFTLYTHAPNSPSALIKHTIESAFFQTIKTRLLKERSKNKDGSYNEFKKL
QVQKRFNEKMELLGSLAKNYQDLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKDVY
IIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPS
VFLYEAGLLKPQ
NT seq 2019 nt   +upstreamnt  +downstreamnt
ttgctagaaaccttacaattaaaccctgagcaattaaaagcggcatcggctttacaaggg
cataatttaatcattgcgagcgctggcacaggaaagacttctacgattgtggggcgcatt
ttacacctgcttgataacggcatcaagcctgaagaaatcttgcttttaactttcaccaat
aaagcgagtagtgaaatgattgcaagggtggctaaatattccaaattaagttctaaaatt
gaagcgggcactttccatgcggtggcgtatcgctatttaaaagagcattatcctaacttg
agcttaaaacaacccaaagaattaagaaagcttttagaaagtattgtggatactaaaaac
gccatagatgacgataaaaagccctacacttcgcagcatttatacgccctctactctctt
tacaccaacgccctaaaacaagaagattttagtgcatggctttctaataaaaaccctgaa
cacacgccatacgccaccttttatgaaaacattttagaagaatttgaaaacaccaaaaaa
aagcacaattatattgactataacgacttgttactgctatttaaaaaggcgatgctagag
acgcctagcccttataaagaagtgctttgcgatgaatttcaagacaccaaccccttacaa
gaatccattttagacgctatcaaccctccaagtttgttttgcgtgggcgattatgatcaa
agcatttacgcttttaatggtgcagatatttctatcatttctaatttcactcaaaaatac
aaaaacgcccaagttttcacgctcactaaaaactaccgctcttctaaagaaattttagat
ctcgctaaccaagtgatccagcacaacaaacgcctttaccctaaaaatttagaagtggtg
aaatcaggggattttaacaagcctacgcttttaaattacaacgacaatattacgcaatgc
caagacatcgctaaacgcattgtaatgcgaaaaaattttaaagaagtggcagtgattttt
aggaataatgcgagcgcggatcaactagaagccgctttaagagcccacaatgtaccaagc
aaaagaaaggggagcgcgagcttttttgaatctaaagaagtggcgttagcgttagatatt
tgcacgcttgtgtttaaccctaaagacattatggcagccattcatgttttaagctatgtg
aatgatattggctctaacaccgctaaagacattcatgaagccttaatgcttttaggcaat
ggggatctcaaattagccctaacccaccccaaccaagaagccaaaatttacacgaagaaa
aaagaaatcacctccatggggctttttgaagaaatttttgctttagaaaatagctcaagg
tttaatggcgtgatagctaaagcgtttcattcgcacccggttttgatgcaccctaagatc
tcactcaatggggctaaaatgttgagcgattttttcactctctatacccatgcccctaat
tcccctagtgccttaatcaaacacaccattgaaagcgcgttttttcaaacgattaaaaca
cgccttttaaaagagcgatccaagaataaggacggatcttataacgaatttaaaaaactg
caagtgcaaaaacgcttcaatgaaaaaatggaattactaggctctttggcgaaaaattac
caggatttagggcgttttttaaacggcactttaataggctctagtgaagccacgcaaggc
gagggcgtgaatttattgagcgtgcatgcctctaaaggcttggaatttaaagatgtttat
atcattgatttaatggaagggcgcttccctaaccataagcttatgaataccggtgggggt
attgaagaagaaaggcggcttttttatgtcgctatcacaagggctaaggaaaatttatgg
ctctcttatgcgaaaaacgaattgagggaaaacgccaaacctaaagagcataagccttcg
gtgtttctgtatgaagcggggcttttgaaaccgcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system