KEGG T00371: Hac

Helicobacter acinonychis: Hac_1349

Entry

Hac_1349          CDS       T00371

Symbol

xseA

Name

(GenBank) exodeoxyribonuclease VII large subunit

K03601

exodeoxyribonuclease VII large subunit [EC:3.1.11.6]

Organism

hac Helicobacter acinonychis

Pathway

hac03430

Mismatch repair

Brite

KEGG Orthology (KO) [BR:hac00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Hac_1349 (xseA)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hac03400]
    Hac_1349 (xseA)
Enzymes [BR:hac01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Hac_1349 (xseA)
DNA repair and recombination proteins [BR:hac03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Hac_1349 (xseA)

SSDB

Motif

Pfam:

Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon SSB

Other DBs

NCBI-ProteinID:

CAK00087

UniProt:

Q17W89

Position

complement(1168879..1170141)

AA seq 420 aa
MDALSVSEINAKIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSVIRCTLFRG
NASKLKFALKEGQEVAVFGAISVYPPRGDYQINCFEIEPKDWGSLALALEQLKEKLRLKG
YFDKENKLPKPSFPKRVAIITSQNSAAWADMQKIAFKRWPMCELVCINTLMQGEGCVQSV
VESIAYADSFYNTRNAFDAIVVARGGGSMEDLYSFNDERIADALHLAKTFSMSAIGHESD
FLLSDSVADLRASTPSNAMEILLPSSEEWQQKLDGFNLKLQRSFKILLHQKKVHLEHLAA
SLKRLSFENKHHLNSLKLEKLKIALENKTLEFLRLKKTLLEKISTQLSTSPFLQTKTERL
NALDNALKLAHAHLKLPKFGAFVSKNNQAIELEELKIGDKIELNNEKARASAAILSVDKA

NT seq 1263 nt +upstreamnt +downstreamnt
atggacgcattgagcgtgagcgaaatcaatgcaaaaattaaagcccttttggaagcgact
tttttgcaagttagggttcaaggggaagtgagtaatttgactatccataaggtgagtggc
catgcgtatttttcgcttaaagacagccaatcagtgattcgatgcaccttgtttaggggg
aacgctagtaagcttaaattcgccttaaaagaagggcaggaagtggctgtttttggggct
attagcgtgtatcctccaaggggggattatcaaatcaattgctttgaaatagagcctaaa
gattggggttcattagctttggctttagagcaattgaaagaaaaattacgccttaaaggc
tattttgataaagaaaataaattacccaaaccaagttttcctaaacgagtggcaatcatc
acttctcaaaattcagccgcttgggcggatatgcaaaagatcgctttcaaacgatggccg
atgtgtgaattggtttgtatcaatactttaatgcaaggggaggggtgcgttcaaagcgtg
gtggagagtatcgcttatgcggatagtttttataacacaagaaacgcttttgatgcgatt
gtggtggctagaggtggggggagcatggaggatttgtattcttttaatgatgaaagaatc
gctgatgcattgcatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttgttgagcgattcggtagcggatttaagggcttctacgccttccaatgcgatggag
attttactccctagcagcgaggaatggcaacaaaagcttgatgggtttaacttgaaattg
caacgctcttttaaaatattactccatcaaaaaaaggtgcatttagagcatttagcggct
tctttaaagcgattgagttttgaaaacaagcaccatttaaattctttaaaactagagaaa
ttaaaaatcgctttagaaaataaaaccttagaatttttacgccttaaaaaaacgctttta
gagaaaatttctacccaactttccacaagcccttttttacaaactaaaacagaacgattg
aatgcactagacaacgcccttaaactcgctcatgcgcatttgaaattgccaaaattcggg
gcgtttgtgagtaaaaacaatcaagcgatagaattagaggaattaaaaattggcgataaa
attgaattgaataacgaaaaagccagagcgagtgctgccattttgagtgttgataaagcg
tag

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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